Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Pcdh15Q99PJ1 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdh15Q99PJ1 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.84■□□□□ 0.77
Pcdh15Q99PJ1 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdh15Q99PJ1 Mir5131-201ENSMUST00000175426 93 ntBASIC19.84■□□□□ 0.77
Pcdh15Q99PJ1 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdh15Q99PJ1 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdh15Q99PJ1 Idnk-204ENSMUST00000226010 1898 ntBASIC19.84■□□□□ 0.77
Pcdh15Q99PJ1 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.77
Pcdh15Q99PJ1 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pcdh15Q99PJ1 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pcdh15Q99PJ1 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pcdh15Q99PJ1 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pcdh15Q99PJ1 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pcdh15Q99PJ1 Gm11779-201ENSMUST00000118541 368 ntBASIC19.83■□□□□ 0.77
Pcdh15Q99PJ1 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC19.83■□□□□ 0.77
Pcdh15Q99PJ1 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC19.83■□□□□ 0.77
Pcdh15Q99PJ1 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Pcdh15Q99PJ1 Cmtm5-203ENSMUST00000227441 610 ntBASIC19.83■□□□□ 0.77
Pcdh15Q99PJ1 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Pcdh15Q99PJ1 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Pcdh15Q99PJ1 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Pcdh15Q99PJ1 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Pcdh15Q99PJ1 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdh15Q99PJ1 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdh15Q99PJ1 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC19.82■□□□□ 0.76
Pcdh15Q99PJ1 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC19.82■□□□□ 0.76
Pcdh15Q99PJ1 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdh15Q99PJ1 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC19.82■□□□□ 0.76
Pcdh15Q99PJ1 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdh15Q99PJ1 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdh15Q99PJ1 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdh15Q99PJ1 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdh15Q99PJ1 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdh15Q99PJ1 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdh15Q99PJ1 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Pcdh15Q99PJ1 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC19.82■□□□□ 0.76
Pcdh15Q99PJ1 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdh15Q99PJ1 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Pcdh15Q99PJ1 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC19.82■□□□□ 0.76
Pcdh15Q99PJ1 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdh15Q99PJ1 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdh15Q99PJ1 Gm1818-201ENSMUST00000169406 1184 ntBASIC19.81■□□□□ 0.76
Pcdh15Q99PJ1 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC19.81■□□□□ 0.76
Pcdh15Q99PJ1 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Pcdh15Q99PJ1 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdh15Q99PJ1 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdh15Q99PJ1 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC19.81■□□□□ 0.76
Pcdh15Q99PJ1 Phf7-203ENSMUST00000226565 1971 ntBASIC19.81■□□□□ 0.76
Pcdh15Q99PJ1 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdh15Q99PJ1 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Pcdh15Q99PJ1 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdh15Q99PJ1 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdh15Q99PJ1 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdh15Q99PJ1 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC19.81■□□□□ 0.76
Pcdh15Q99PJ1 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdh15Q99PJ1 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC19.8■□□□□ 0.76
Pcdh15Q99PJ1 Gm12350-201ENSMUST00000121208 462 ntBASIC19.8■□□□□ 0.76
Pcdh15Q99PJ1 AC153794.1-201ENSMUST00000169148 126 ntBASIC19.8■□□□□ 0.76
Pcdh15Q99PJ1 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdh15Q99PJ1 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdh15Q99PJ1 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdh15Q99PJ1 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdh15Q99PJ1 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdh15Q99PJ1 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdh15Q99PJ1 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.8■□□□□ 0.76
Pcdh15Q99PJ1 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdh15Q99PJ1 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdh15Q99PJ1 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdh15Q99PJ1 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC19.8■□□□□ 0.76
Pcdh15Q99PJ1 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdh15Q99PJ1 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdh15Q99PJ1 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC19.79■□□□□ 0.76
Pcdh15Q99PJ1 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdh15Q99PJ1 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdh15Q99PJ1 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdh15Q99PJ1 Golph3-205ENSMUST00000228671 2842 ntBASIC19.79■□□□□ 0.76
Pcdh15Q99PJ1 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdh15Q99PJ1 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Pcdh15Q99PJ1 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdh15Q99PJ1 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC19.79■□□□□ 0.76
Pcdh15Q99PJ1 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdh15Q99PJ1 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdh15Q99PJ1 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdh15Q99PJ1 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdh15Q99PJ1 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdh15Q99PJ1 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC19.78■□□□□ 0.76
Pcdh15Q99PJ1 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC19.78■□□□□ 0.76
Pcdh15Q99PJ1 Gm27000-201ENSMUST00000182943 842 ntBASIC19.78■□□□□ 0.76
Pcdh15Q99PJ1 Gm6296-201ENSMUST00000222599 943 ntBASIC19.78■□□□□ 0.76
Pcdh15Q99PJ1 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdh15Q99PJ1 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdh15Q99PJ1 Gm32996-201ENSMUST00000199828 1447 ntBASIC19.78■□□□□ 0.76
Pcdh15Q99PJ1 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdh15Q99PJ1 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC19.78■□□□□ 0.76
Pcdh15Q99PJ1 Gm18421-201ENSMUST00000204122 625 ntBASIC19.78■□□□□ 0.76
Pcdh15Q99PJ1 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Pcdh15Q99PJ1 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdh15Q99PJ1 Gm13186-201ENSMUST00000118031 316 ntBASIC19.77■□□□□ 0.76
Pcdh15Q99PJ1 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms