Protein–RNA interactions for Protein: Q99MS8

Tpgs1, Tubulin polyglutamylase complex subunit 1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpgs1Q99MS8 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
Tpgs1Q99MS8 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tpgs1Q99MS8 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tpgs1Q99MS8 Gm27463-201ENSMUST00000183569 57 ntBASIC18.15■□□□□ 0.5
Tpgs1Q99MS8 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC18.15■□□□□ 0.5
Tpgs1Q99MS8 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tpgs1Q99MS8 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tpgs1Q99MS8 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.15■□□□□ 0.5
Tpgs1Q99MS8 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Tpgs1Q99MS8 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tpgs1Q99MS8 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.15■□□□□ 0.5
Tpgs1Q99MS8 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Tpgs1Q99MS8 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tpgs1Q99MS8 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tpgs1Q99MS8 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Tpgs1Q99MS8 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.14■□□□□ 0.49
Tpgs1Q99MS8 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tpgs1Q99MS8 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tpgs1Q99MS8 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Tpgs1Q99MS8 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC18.14■□□□□ 0.49
Tpgs1Q99MS8 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC18.14■□□□□ 0.49
Tpgs1Q99MS8 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tpgs1Q99MS8 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC18.14■□□□□ 0.49
Tpgs1Q99MS8 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.14■□□□□ 0.49
Tpgs1Q99MS8 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Tpgs1Q99MS8 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tpgs1Q99MS8 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tpgs1Q99MS8 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tpgs1Q99MS8 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tpgs1Q99MS8 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tpgs1Q99MS8 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tpgs1Q99MS8 AC154231.1-201ENSMUST00000220564 2175 ntBASIC18.13■□□□□ 0.49
Tpgs1Q99MS8 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Tpgs1Q99MS8 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Tpgs1Q99MS8 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC18.13■□□□□ 0.49
Tpgs1Q99MS8 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
Tpgs1Q99MS8 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Tpgs1Q99MS8 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tpgs1Q99MS8 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tpgs1Q99MS8 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Tpgs1Q99MS8 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tpgs1Q99MS8 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.12■□□□□ 0.49
Tpgs1Q99MS8 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tpgs1Q99MS8 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tpgs1Q99MS8 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Tpgs1Q99MS8 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tpgs1Q99MS8 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tpgs1Q99MS8 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tpgs1Q99MS8 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC18.12■□□□□ 0.49
Tpgs1Q99MS8 AC120002.2-201ENSMUST00000220205 773 ntBASIC18.12■□□□□ 0.49
Tpgs1Q99MS8 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tpgs1Q99MS8 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tpgs1Q99MS8 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tpgs1Q99MS8 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tpgs1Q99MS8 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tpgs1Q99MS8 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tpgs1Q99MS8 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
Tpgs1Q99MS8 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tpgs1Q99MS8 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tpgs1Q99MS8 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tpgs1Q99MS8 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC18.11■□□□□ 0.49
Tpgs1Q99MS8 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Tpgs1Q99MS8 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tpgs1Q99MS8 Gm30025-201ENSMUST00000218555 728 ntBASIC18.11■□□□□ 0.49
Tpgs1Q99MS8 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tpgs1Q99MS8 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Tpgs1Q99MS8 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Tpgs1Q99MS8 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Tpgs1Q99MS8 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tpgs1Q99MS8 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Tpgs1Q99MS8 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tpgs1Q99MS8 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tpgs1Q99MS8 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
Tpgs1Q99MS8 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tpgs1Q99MS8 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Tpgs1Q99MS8 Gm7791-201ENSMUST00000219066 539 ntBASIC18.1■□□□□ 0.49
Tpgs1Q99MS8 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tpgs1Q99MS8 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Tpgs1Q99MS8 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tpgs1Q99MS8 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tpgs1Q99MS8 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tpgs1Q99MS8 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Tpgs1Q99MS8 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Tpgs1Q99MS8 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Tpgs1Q99MS8 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Tpgs1Q99MS8 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tpgs1Q99MS8 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tpgs1Q99MS8 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Tpgs1Q99MS8 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tpgs1Q99MS8 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tpgs1Q99MS8 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tpgs1Q99MS8 Gm20472-201ENSMUST00000174403 1240 ntBASIC18.09■□□□□ 0.49
Tpgs1Q99MS8 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Tpgs1Q99MS8 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tpgs1Q99MS8 Gm43808-201ENSMUST00000202534 2065 ntBASIC18.09■□□□□ 0.49
Tpgs1Q99MS8 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
Tpgs1Q99MS8 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tpgs1Q99MS8 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tpgs1Q99MS8 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Tpgs1Q99MS8 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms