Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Tlr3Q99MB1 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Tlr3Q99MB1 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tlr3Q99MB1 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC18.72■□□□□ 0.59
Tlr3Q99MB1 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Tlr3Q99MB1 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Tlr3Q99MB1 Gm10698-201ENSMUST00000182663 604 ntBASIC18.71■□□□□ 0.59
Tlr3Q99MB1 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Tlr3Q99MB1 AC153881.1-201ENSMUST00000214448 284 ntBASIC18.71■□□□□ 0.59
Tlr3Q99MB1 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tlr3Q99MB1 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Tlr3Q99MB1 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tlr3Q99MB1 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tlr3Q99MB1 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tlr3Q99MB1 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tlr3Q99MB1 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tlr3Q99MB1 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tlr3Q99MB1 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tlr3Q99MB1 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Tlr3Q99MB1 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Tlr3Q99MB1 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Tlr3Q99MB1 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tlr3Q99MB1 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tlr3Q99MB1 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Tlr3Q99MB1 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC18.7■□□□□ 0.58
Tlr3Q99MB1 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Tlr3Q99MB1 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Tlr3Q99MB1 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tlr3Q99MB1 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Tlr3Q99MB1 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tlr3Q99MB1 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tlr3Q99MB1 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tlr3Q99MB1 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tlr3Q99MB1 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tlr3Q99MB1 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tlr3Q99MB1 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.69■□□□□ 0.58
Tlr3Q99MB1 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC18.69■□□□□ 0.58
Tlr3Q99MB1 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tlr3Q99MB1 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.69■□□□□ 0.58
Tlr3Q99MB1 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tlr3Q99MB1 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC18.69■□□□□ 0.58
Tlr3Q99MB1 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tlr3Q99MB1 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Tlr3Q99MB1 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tlr3Q99MB1 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tlr3Q99MB1 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
Tlr3Q99MB1 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tlr3Q99MB1 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tlr3Q99MB1 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tlr3Q99MB1 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tlr3Q99MB1 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC18.68■□□□□ 0.58
Tlr3Q99MB1 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tlr3Q99MB1 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tlr3Q99MB1 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tlr3Q99MB1 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tlr3Q99MB1 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tlr3Q99MB1 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tlr3Q99MB1 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tlr3Q99MB1 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC18.67■□□□□ 0.58
Tlr3Q99MB1 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Tlr3Q99MB1 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tlr3Q99MB1 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tlr3Q99MB1 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tlr3Q99MB1 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tlr3Q99MB1 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tlr3Q99MB1 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tlr3Q99MB1 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC18.67■□□□□ 0.58
Tlr3Q99MB1 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC18.67■□□□□ 0.58
Tlr3Q99MB1 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tlr3Q99MB1 Gm29994-201ENSMUST00000195495 1193 ntBASIC18.67■□□□□ 0.58
Tlr3Q99MB1 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tlr3Q99MB1 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tlr3Q99MB1 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tlr3Q99MB1 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Tlr3Q99MB1 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tlr3Q99MB1 AC124581.1-201ENSMUST00000225416 1399 ntBASIC18.67■□□□□ 0.58
Tlr3Q99MB1 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tlr3Q99MB1 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Tlr3Q99MB1 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Tlr3Q99MB1 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC18.66■□□□□ 0.58
Tlr3Q99MB1 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Tlr3Q99MB1 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
Tlr3Q99MB1 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC18.66■□□□□ 0.58
Tlr3Q99MB1 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Tlr3Q99MB1 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tlr3Q99MB1 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Tlr3Q99MB1 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tlr3Q99MB1 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tlr3Q99MB1 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tlr3Q99MB1 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tlr3Q99MB1 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tlr3Q99MB1 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tlr3Q99MB1 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tlr3Q99MB1 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tlr3Q99MB1 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tlr3Q99MB1 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
Tlr3Q99MB1 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tlr3Q99MB1 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Tlr3Q99MB1 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tlr3Q99MB1 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms