Protein–RNA interactions for Protein: Q99LI2

Clcc1, Chloride channel CLIC-like protein 1, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcc1Q99LI2 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Clcc1Q99LI2 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Clcc1Q99LI2 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.23■□□□□ 0.35
Clcc1Q99LI2 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Clcc1Q99LI2 Gm38027-201ENSMUST00000192315 235 ntBASIC17.23■□□□□ 0.35
Clcc1Q99LI2 Gm8969-201ENSMUST00000199694 526 ntBASIC17.23■□□□□ 0.35
Clcc1Q99LI2 Gm4974-201ENSMUST00000209974 875 ntBASIC17.23■□□□□ 0.35
Clcc1Q99LI2 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Clcc1Q99LI2 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Clcc1Q99LI2 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Clcc1Q99LI2 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Clcc1Q99LI2 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Clcc1Q99LI2 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.23■□□□□ 0.35
Clcc1Q99LI2 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Clcc1Q99LI2 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Clcc1Q99LI2 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Clcc1Q99LI2 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Clcc1Q99LI2 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Clcc1Q99LI2 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Clcc1Q99LI2 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Clcc1Q99LI2 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clcc1Q99LI2 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clcc1Q99LI2 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clcc1Q99LI2 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clcc1Q99LI2 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clcc1Q99LI2 Gm13401-201ENSMUST00000117074 291 ntBASIC17.22■□□□□ 0.35
Clcc1Q99LI2 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clcc1Q99LI2 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Clcc1Q99LI2 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.22■□□□□ 0.35
Clcc1Q99LI2 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Clcc1Q99LI2 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clcc1Q99LI2 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.22■□□□□ 0.35
Clcc1Q99LI2 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.22■□□□□ 0.35
Clcc1Q99LI2 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Clcc1Q99LI2 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clcc1Q99LI2 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Clcc1Q99LI2 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clcc1Q99LI2 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clcc1Q99LI2 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Clcc1Q99LI2 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clcc1Q99LI2 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clcc1Q99LI2 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clcc1Q99LI2 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Clcc1Q99LI2 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clcc1Q99LI2 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Clcc1Q99LI2 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Clcc1Q99LI2 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.21■□□□□ 0.35
Clcc1Q99LI2 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.21■□□□□ 0.35
Clcc1Q99LI2 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC17.21■□□□□ 0.35
Clcc1Q99LI2 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clcc1Q99LI2 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.21■□□□□ 0.35
Clcc1Q99LI2 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
Clcc1Q99LI2 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.21■□□□□ 0.35
Clcc1Q99LI2 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clcc1Q99LI2 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
Clcc1Q99LI2 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
Clcc1Q99LI2 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clcc1Q99LI2 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clcc1Q99LI2 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clcc1Q99LI2 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clcc1Q99LI2 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Clcc1Q99LI2 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Clcc1Q99LI2 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clcc1Q99LI2 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Clcc1Q99LI2 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Clcc1Q99LI2 Gm27463-201ENSMUST00000183569 57 ntBASIC17.2■□□□□ 0.34
Clcc1Q99LI2 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.2■□□□□ 0.34
Clcc1Q99LI2 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clcc1Q99LI2 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Clcc1Q99LI2 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.2■□□□□ 0.34
Clcc1Q99LI2 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clcc1Q99LI2 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clcc1Q99LI2 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clcc1Q99LI2 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clcc1Q99LI2 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Clcc1Q99LI2 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clcc1Q99LI2 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Clcc1Q99LI2 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Clcc1Q99LI2 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Clcc1Q99LI2 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Clcc1Q99LI2 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Clcc1Q99LI2 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.19■□□□□ 0.34
Clcc1Q99LI2 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Clcc1Q99LI2 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.19■□□□□ 0.34
Clcc1Q99LI2 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Clcc1Q99LI2 Gm18959-201ENSMUST00000208954 655 ntBASIC17.19■□□□□ 0.34
Clcc1Q99LI2 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Clcc1Q99LI2 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Clcc1Q99LI2 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Clcc1Q99LI2 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Clcc1Q99LI2 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Clcc1Q99LI2 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Clcc1Q99LI2 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.19■□□□□ 0.34
Clcc1Q99LI2 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.19■□□□□ 0.34
Clcc1Q99LI2 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Clcc1Q99LI2 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Clcc1Q99LI2 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Clcc1Q99LI2 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Clcc1Q99LI2 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Clcc1Q99LI2 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms