Protein–RNA interactions for Protein: Q99J10

Ctu1, Cytoplasmic tRNA 2-thiolation protein 1, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctu1Q99J10 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ctu1Q99J10 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ctu1Q99J10 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ctu1Q99J10 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ctu1Q99J10 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ctu1Q99J10 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ctu1Q99J10 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ctu1Q99J10 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ctu1Q99J10 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ctu1Q99J10 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC19.36■□□□□ 0.69
Ctu1Q99J10 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC19.36■□□□□ 0.69
Ctu1Q99J10 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ctu1Q99J10 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Ctu1Q99J10 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Ctu1Q99J10 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ctu1Q99J10 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ctu1Q99J10 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ctu1Q99J10 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC19.36■□□□□ 0.69
Ctu1Q99J10 Spr-ps1-201ENSMUST00000089584 605 ntBASIC19.36■□□□□ 0.69
Ctu1Q99J10 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ctu1Q99J10 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ctu1Q99J10 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ctu1Q99J10 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ctu1Q99J10 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ctu1Q99J10 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.35■□□□□ 0.69
Ctu1Q99J10 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ctu1Q99J10 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ctu1Q99J10 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ctu1Q99J10 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ctu1Q99J10 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ctu1Q99J10 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ctu1Q99J10 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC19.35■□□□□ 0.69
Ctu1Q99J10 Gm45328-201ENSMUST00000210942 917 ntBASIC19.35■□□□□ 0.69
Ctu1Q99J10 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ctu1Q99J10 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ctu1Q99J10 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Ctu1Q99J10 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ctu1Q99J10 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC19.34■□□□□ 0.69
Ctu1Q99J10 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ctu1Q99J10 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ctu1Q99J10 Mir8112-201ENSMUST00000184382 131 ntBASIC19.34■□□□□ 0.69
Ctu1Q99J10 Gm34391-201ENSMUST00000203706 907 ntBASIC19.34■□□□□ 0.69
Ctu1Q99J10 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ctu1Q99J10 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.34■□□□□ 0.69
Ctu1Q99J10 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ctu1Q99J10 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ctu1Q99J10 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ctu1Q99J10 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Ctu1Q99J10 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ctu1Q99J10 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Ctu1Q99J10 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ctu1Q99J10 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ctu1Q99J10 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Ctu1Q99J10 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Ctu1Q99J10 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ctu1Q99J10 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.33■□□□□ 0.69
Ctu1Q99J10 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ctu1Q99J10 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ctu1Q99J10 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Ctu1Q99J10 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ctu1Q99J10 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ctu1Q99J10 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ctu1Q99J10 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ctu1Q99J10 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ctu1Q99J10 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ctu1Q99J10 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ctu1Q99J10 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC19.32■□□□□ 0.68
Ctu1Q99J10 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ctu1Q99J10 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ctu1Q99J10 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ctu1Q99J10 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Ctu1Q99J10 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ctu1Q99J10 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ctu1Q99J10 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ctu1Q99J10 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
Ctu1Q99J10 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ctu1Q99J10 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Ctu1Q99J10 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ctu1Q99J10 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ctu1Q99J10 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC19.31■□□□□ 0.68
Ctu1Q99J10 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ctu1Q99J10 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ctu1Q99J10 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ctu1Q99J10 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC19.31■□□□□ 0.68
Ctu1Q99J10 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC19.31■□□□□ 0.68
Ctu1Q99J10 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ctu1Q99J10 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ctu1Q99J10 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ctu1Q99J10 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ctu1Q99J10 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ctu1Q99J10 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ctu1Q99J10 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Ctu1Q99J10 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ctu1Q99J10 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ctu1Q99J10 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Ctu1Q99J10 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
Ctu1Q99J10 Cxcl14-202ENSMUST00000224801 1467 ntBASIC19.3■□□□□ 0.68
Ctu1Q99J10 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Ctu1Q99J10 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ctu1Q99J10 Gm19721-201ENSMUST00000195284 1764 ntBASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms