Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18.54■□□□□ 0.56
Pcdha9Q91Y11 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdha9Q91Y11 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdha9Q91Y11 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdha9Q91Y11 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
Pcdha9Q91Y11 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.54■□□□□ 0.56
Pcdha9Q91Y11 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdha9Q91Y11 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Pcdha9Q91Y11 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdha9Q91Y11 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdha9Q91Y11 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC18.54■□□□□ 0.56
Pcdha9Q91Y11 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.53■□□□□ 0.56
Pcdha9Q91Y11 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdha9Q91Y11 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdha9Q91Y11 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdha9Q91Y11 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC18.53■□□□□ 0.56
Pcdha9Q91Y11 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC18.53■□□□□ 0.56
Pcdha9Q91Y11 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdha9Q91Y11 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
Pcdha9Q91Y11 Odf3b-204ENSMUST00000227834 930 ntBASIC18.53■□□□□ 0.56
Pcdha9Q91Y11 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdha9Q91Y11 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdha9Q91Y11 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdha9Q91Y11 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdha9Q91Y11 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Pcdha9Q91Y11 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC18.53■□□□□ 0.56
Pcdha9Q91Y11 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
Pcdha9Q91Y11 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.53■□□□□ 0.56
Pcdha9Q91Y11 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdha9Q91Y11 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdha9Q91Y11 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdha9Q91Y11 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdha9Q91Y11 Gm12085-201ENSMUST00000119263 940 ntBASIC18.52■□□□□ 0.56
Pcdha9Q91Y11 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
Pcdha9Q91Y11 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC18.52■□□□□ 0.56
Pcdha9Q91Y11 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdha9Q91Y11 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdha9Q91Y11 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Pcdha9Q91Y11 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdha9Q91Y11 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdha9Q91Y11 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.55
Pcdha9Q91Y11 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Pcdha9Q91Y11 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.55
Pcdha9Q91Y11 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC18.52■□□□□ 0.55
Pcdha9Q91Y11 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Pcdha9Q91Y11 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdha9Q91Y11 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdha9Q91Y11 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdha9Q91Y11 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC18.51■□□□□ 0.55
Pcdha9Q91Y11 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC18.51■□□□□ 0.55
Pcdha9Q91Y11 Mir5122-201ENSMUST00000175004 89 ntBASIC18.51■□□□□ 0.55
Pcdha9Q91Y11 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdha9Q91Y11 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC18.51■□□□□ 0.55
Pcdha9Q91Y11 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdha9Q91Y11 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdha9Q91Y11 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdha9Q91Y11 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdha9Q91Y11 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdha9Q91Y11 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdha9Q91Y11 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdha9Q91Y11 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdha9Q91Y11 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Pcdha9Q91Y11 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdha9Q91Y11 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Pcdha9Q91Y11 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC18.5■□□□□ 0.55
Pcdha9Q91Y11 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdha9Q91Y11 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdha9Q91Y11 Gm38027-201ENSMUST00000192315 235 ntBASIC18.5■□□□□ 0.55
Pcdha9Q91Y11 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC18.5■□□□□ 0.55
Pcdha9Q91Y11 Gm21814-202ENSMUST00000203277 873 ntBASIC18.5■□□□□ 0.55
Pcdha9Q91Y11 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdha9Q91Y11 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdha9Q91Y11 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdha9Q91Y11 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdha9Q91Y11 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Pcdha9Q91Y11 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.5■□□□□ 0.55
Pcdha9Q91Y11 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdha9Q91Y11 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdha9Q91Y11 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdha9Q91Y11 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Pcdha9Q91Y11 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdha9Q91Y11 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdha9Q91Y11 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.49■□□□□ 0.55
Pcdha9Q91Y11 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.49■□□□□ 0.55
Pcdha9Q91Y11 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC18.49■□□□□ 0.55
Pcdha9Q91Y11 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdha9Q91Y11 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdha9Q91Y11 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdha9Q91Y11 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdha9Q91Y11 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdha9Q91Y11 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdha9Q91Y11 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdha9Q91Y11 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdha9Q91Y11 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Pcdha9Q91Y11 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
Pcdha9Q91Y11 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdha9Q91Y11 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdha9Q91Y11 Gm37025-201ENSMUST00000195159 829 ntBASIC18.48■□□□□ 0.55
Pcdha9Q91Y11 Arhgef4-208ENSMUST00000211073 171 ntBASIC18.48■□□□□ 0.55
Pcdha9Q91Y11 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms