Protein–RNA interactions for Protein: Q91XX6

Pcdhgb4, Protocadherin gamma B4, mousemouse

Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb4Q91XX6 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhgb4Q91XX6 Mir6349-201ENSMUST00000184059 97 ntBASIC18.45■□□□□ 0.54
Pcdhgb4Q91XX6 Gm29257-201ENSMUST00000186115 639 ntBASIC18.45■□□□□ 0.54
Pcdhgb4Q91XX6 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhgb4Q91XX6 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Pcdhgb4Q91XX6 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Pcdhgb4Q91XX6 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Pcdhgb4Q91XX6 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Pcdhgb4Q91XX6 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC18.45■□□□□ 0.54
Pcdhgb4Q91XX6 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhgb4Q91XX6 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhgb4Q91XX6 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhgb4Q91XX6 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhgb4Q91XX6 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhgb4Q91XX6 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhgb4Q91XX6 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhgb4Q91XX6 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhgb4Q91XX6 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhgb4Q91XX6 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhgb4Q91XX6 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhgb4Q91XX6 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Pcdhgb4Q91XX6 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhgb4Q91XX6 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Pcdhgb4Q91XX6 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhgb4Q91XX6 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.44■□□□□ 0.54
Pcdhgb4Q91XX6 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhgb4Q91XX6 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.44■□□□□ 0.54
Pcdhgb4Q91XX6 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Pcdhgb4Q91XX6 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC18.44■□□□□ 0.54
Pcdhgb4Q91XX6 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhgb4Q91XX6 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhgb4Q91XX6 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhgb4Q91XX6 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhgb4Q91XX6 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhgb4Q91XX6 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.44■□□□□ 0.54
Pcdhgb4Q91XX6 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhgb4Q91XX6 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhgb4Q91XX6 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhgb4Q91XX6 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Pcdhgb4Q91XX6 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC18.43■□□□□ 0.54
Pcdhgb4Q91XX6 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhgb4Q91XX6 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhgb4Q91XX6 Gm12527-201ENSMUST00000117967 564 ntBASIC18.43■□□□□ 0.54
Pcdhgb4Q91XX6 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC18.43■□□□□ 0.54
Pcdhgb4Q91XX6 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC18.43■□□□□ 0.54
Pcdhgb4Q91XX6 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhgb4Q91XX6 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC18.43■□□□□ 0.54
Pcdhgb4Q91XX6 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhgb4Q91XX6 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhgb4Q91XX6 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhgb4Q91XX6 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Pcdhgb4Q91XX6 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhgb4Q91XX6 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhgb4Q91XX6 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhgb4Q91XX6 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhgb4Q91XX6 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhgb4Q91XX6 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhgb4Q91XX6 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhgb4Q91XX6 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhgb4Q91XX6 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC18.42■□□□□ 0.54
Pcdhgb4Q91XX6 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhgb4Q91XX6 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhgb4Q91XX6 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhgb4Q91XX6 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.42■□□□□ 0.54
Pcdhgb4Q91XX6 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhgb4Q91XX6 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC18.42■□□□□ 0.54
Pcdhgb4Q91XX6 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhgb4Q91XX6 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhgb4Q91XX6 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
Pcdhgb4Q91XX6 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC18.42■□□□□ 0.54
Pcdhgb4Q91XX6 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.42■□□□□ 0.54
Pcdhgb4Q91XX6 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhgb4Q91XX6 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC18.42■□□□□ 0.54
Pcdhgb4Q91XX6 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhgb4Q91XX6 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhgb4Q91XX6 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Pcdhgb4Q91XX6 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhgb4Q91XX6 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhgb4Q91XX6 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhgb4Q91XX6 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Pcdhgb4Q91XX6 Gm13158-201ENSMUST00000122007 736 ntBASIC18.41■□□□□ 0.54
Pcdhgb4Q91XX6 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhgb4Q91XX6 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.41■□□□□ 0.54
Pcdhgb4Q91XX6 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Pcdhgb4Q91XX6 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhgb4Q91XX6 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhgb4Q91XX6 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhgb4Q91XX6 Gm43272-201ENSMUST00000200599 1584 ntBASIC18.41■□□□□ 0.54
Pcdhgb4Q91XX6 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhgb4Q91XX6 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Pcdhgb4Q91XX6 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhgb4Q91XX6 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhgb4Q91XX6 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhgb4Q91XX6 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhgb4Q91XX6 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhgb4Q91XX6 Gm7292-201ENSMUST00000194706 2527 ntBASIC18.4■□□□□ 0.54
Pcdhgb4Q91XX6 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhgb4Q91XX6 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhgb4Q91XX6 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhgb4Q91XX6 Gm6576-201ENSMUST00000169678 883 ntBASIC18.4■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms