Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trex1Q91XB0 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC19.98■□□□□ 0.79
Trex1Q91XB0 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trex1Q91XB0 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trex1Q91XB0 Gm9103-201ENSMUST00000119371 405 ntBASIC19.98■□□□□ 0.79
Trex1Q91XB0 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC19.98■□□□□ 0.79
Trex1Q91XB0 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Trex1Q91XB0 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trex1Q91XB0 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trex1Q91XB0 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trex1Q91XB0 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trex1Q91XB0 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trex1Q91XB0 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trex1Q91XB0 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Trex1Q91XB0 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Trex1Q91XB0 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trex1Q91XB0 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trex1Q91XB0 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trex1Q91XB0 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trex1Q91XB0 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trex1Q91XB0 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trex1Q91XB0 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC19.97■□□□□ 0.79
Trex1Q91XB0 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC19.97■□□□□ 0.79
Trex1Q91XB0 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Trex1Q91XB0 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.97■□□□□ 0.79
Trex1Q91XB0 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trex1Q91XB0 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trex1Q91XB0 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Trex1Q91XB0 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trex1Q91XB0 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC19.96■□□□□ 0.79
Trex1Q91XB0 Gm19721-201ENSMUST00000195284 1764 ntBASIC19.96■□□□□ 0.79
Trex1Q91XB0 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trex1Q91XB0 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Trex1Q91XB0 Gm26039-201ENSMUST00000158152 144 ntBASIC19.96■□□□□ 0.79
Trex1Q91XB0 Gm27704-201ENSMUST00000185094 107 ntBASIC19.96■□□□□ 0.79
Trex1Q91XB0 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trex1Q91XB0 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trex1Q91XB0 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trex1Q91XB0 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trex1Q91XB0 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Trex1Q91XB0 Gm11355-201ENSMUST00000121120 306 ntBASIC19.95■□□□□ 0.78
Trex1Q91XB0 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC19.95■□□□□ 0.78
Trex1Q91XB0 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trex1Q91XB0 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC19.95■□□□□ 0.78
Trex1Q91XB0 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Trex1Q91XB0 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trex1Q91XB0 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC19.95■□□□□ 0.78
Trex1Q91XB0 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trex1Q91XB0 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trex1Q91XB0 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trex1Q91XB0 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trex1Q91XB0 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trex1Q91XB0 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trex1Q91XB0 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trex1Q91XB0 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trex1Q91XB0 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Trex1Q91XB0 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trex1Q91XB0 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
Trex1Q91XB0 Gm27741-201ENSMUST00000185060 237 ntBASIC19.94■□□□□ 0.78
Trex1Q91XB0 Gm17808-201ENSMUST00000200859 894 ntBASIC19.94■□□□□ 0.78
Trex1Q91XB0 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC19.94■□□□□ 0.78
Trex1Q91XB0 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trex1Q91XB0 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trex1Q91XB0 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trex1Q91XB0 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trex1Q91XB0 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trex1Q91XB0 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trex1Q91XB0 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trex1Q91XB0 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.94■□□□□ 0.78
Trex1Q91XB0 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trex1Q91XB0 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trex1Q91XB0 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trex1Q91XB0 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trex1Q91XB0 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trex1Q91XB0 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trex1Q91XB0 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trex1Q91XB0 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trex1Q91XB0 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Trex1Q91XB0 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Trex1Q91XB0 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC19.93■□□□□ 0.78
Trex1Q91XB0 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trex1Q91XB0 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trex1Q91XB0 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Trex1Q91XB0 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trex1Q91XB0 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trex1Q91XB0 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trex1Q91XB0 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Trex1Q91XB0 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Trex1Q91XB0 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Trex1Q91XB0 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Trex1Q91XB0 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trex1Q91XB0 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trex1Q91XB0 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC19.92■□□□□ 0.78
Trex1Q91XB0 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Trex1Q91XB0 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.92■□□□□ 0.78
Trex1Q91XB0 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trex1Q91XB0 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Trex1Q91XB0 Actl10-202ENSMUST00000226583 1501 ntBASIC19.92■□□□□ 0.78
Trex1Q91XB0 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Trex1Q91XB0 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms