Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb17Q91VD8 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb17Q91VD8 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb17Q91VD8 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb17Q91VD8 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.05■□□□□ 0.48
Pcdhb17Q91VD8 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb17Q91VD8 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Pcdhb17Q91VD8 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb17Q91VD8 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb17Q91VD8 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb17Q91VD8 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb17Q91VD8 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb17Q91VD8 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.05■□□□□ 0.48
Pcdhb17Q91VD8 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC18.05■□□□□ 0.48
Pcdhb17Q91VD8 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb17Q91VD8 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.05■□□□□ 0.48
Pcdhb17Q91VD8 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.05■□□□□ 0.48
Pcdhb17Q91VD8 4930405J17Rik-201ENSMUST00000214323 620 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb17Q91VD8 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb17Q91VD8 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb17Q91VD8 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb17Q91VD8 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb17Q91VD8 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Pcdhb17Q91VD8 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb17Q91VD8 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Pcdhb17Q91VD8 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb17Q91VD8 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb17Q91VD8 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Pcdhb17Q91VD8 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb17Q91VD8 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb17Q91VD8 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Pcdhb17Q91VD8 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb17Q91VD8 B430010I23Rik-202ENSMUST00000152188 1168 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb17Q91VD8 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb17Q91VD8 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb17Q91VD8 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb17Q91VD8 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb17Q91VD8 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.03■□□□□ 0.48
Pcdhb17Q91VD8 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
Pcdhb17Q91VD8 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb17Q91VD8 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb17Q91VD8 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb17Q91VD8 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
Pcdhb17Q91VD8 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18.03■□□□□ 0.48
Pcdhb17Q91VD8 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb17Q91VD8 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb17Q91VD8 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb17Q91VD8 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb17Q91VD8 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb17Q91VD8 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb17Q91VD8 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb17Q91VD8 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb17Q91VD8 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhb17Q91VD8 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.02■□□□□ 0.48
Pcdhb17Q91VD8 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhb17Q91VD8 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.02■□□□□ 0.48
Pcdhb17Q91VD8 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
Pcdhb17Q91VD8 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.02■□□□□ 0.48
Pcdhb17Q91VD8 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Pcdhb17Q91VD8 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC18.02■□□□□ 0.48
Pcdhb17Q91VD8 Gm3375-201ENSMUST00000203929 796 ntBASIC18.02■□□□□ 0.48
Pcdhb17Q91VD8 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC18.02■□□□□ 0.48
Pcdhb17Q91VD8 AC124408.1-201ENSMUST00000228938 707 ntBASIC18.02■□□□□ 0.48
Pcdhb17Q91VD8 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhb17Q91VD8 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
Pcdhb17Q91VD8 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
Pcdhb17Q91VD8 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Pcdhb17Q91VD8 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Pcdhb17Q91VD8 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb17Q91VD8 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb17Q91VD8 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
Pcdhb17Q91VD8 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Pcdhb17Q91VD8 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb17Q91VD8 AV099323-201ENSMUST00000124336 921 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb17Q91VD8 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Pcdhb17Q91VD8 Gm20618-202ENSMUST00000177482 1227 ntTSL 3 BASIC18.01■□□□□ 0.47
Pcdhb17Q91VD8 Gm9484-201ENSMUST00000195892 1159 ntBASIC18.01■□□□□ 0.47
Pcdhb17Q91VD8 Arhgef4-208ENSMUST00000211073 171 ntBASIC18.01■□□□□ 0.47
Pcdhb17Q91VD8 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Pcdhb17Q91VD8 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb17Q91VD8 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb17Q91VD8 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb17Q91VD8 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb17Q91VD8 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb17Q91VD8 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb17Q91VD8 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb17Q91VD8 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb17Q91VD8 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Pcdhb17Q91VD8 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC18■□□□□ 0.47
Pcdhb17Q91VD8 Gm20825-201ENSMUST00000178149 1226 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb17Q91VD8 Gm38027-201ENSMUST00000192315 235 ntBASIC18■□□□□ 0.47
Pcdhb17Q91VD8 2210412B16Rik-201ENSMUST00000201281 498 ntBASIC18■□□□□ 0.47
Pcdhb17Q91VD8 Fcho2-208ENSMUST00000224992 2964 ntBASIC18■□□□□ 0.47
Pcdhb17Q91VD8 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb17Q91VD8 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb17Q91VD8 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb17Q91VD8 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Pcdhb17Q91VD8 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC18■□□□□ 0.47
Pcdhb17Q91VD8 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb17Q91VD8 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms