Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
StrcQ8VIM6 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
StrcQ8VIM6 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC20.9■□□□□ 0.94
StrcQ8VIM6 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
StrcQ8VIM6 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
StrcQ8VIM6 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC20.9■□□□□ 0.94
StrcQ8VIM6 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
StrcQ8VIM6 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
StrcQ8VIM6 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC20.9■□□□□ 0.94
StrcQ8VIM6 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
StrcQ8VIM6 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
StrcQ8VIM6 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
StrcQ8VIM6 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
StrcQ8VIM6 Gm18195-201ENSMUST00000207604 706 ntBASIC20.9■□□□□ 0.94
StrcQ8VIM6 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
StrcQ8VIM6 Gm5784-201ENSMUST00000179344 2478 ntBASIC20.9■□□□□ 0.94
StrcQ8VIM6 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
StrcQ8VIM6 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
StrcQ8VIM6 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
StrcQ8VIM6 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
StrcQ8VIM6 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC20.89■□□□□ 0.93
StrcQ8VIM6 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
StrcQ8VIM6 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
StrcQ8VIM6 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
StrcQ8VIM6 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
StrcQ8VIM6 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
StrcQ8VIM6 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
StrcQ8VIM6 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
StrcQ8VIM6 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
StrcQ8VIM6 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
StrcQ8VIM6 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC20.88■□□□□ 0.93
StrcQ8VIM6 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC20.88■□□□□ 0.93
StrcQ8VIM6 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
StrcQ8VIM6 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
StrcQ8VIM6 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
StrcQ8VIM6 Gm32996-201ENSMUST00000199828 1447 ntBASIC20.87■□□□□ 0.93
StrcQ8VIM6 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
StrcQ8VIM6 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
StrcQ8VIM6 Gm11594-201ENSMUST00000122313 162 ntBASIC20.87■□□□□ 0.93
StrcQ8VIM6 Gm1818-201ENSMUST00000169406 1184 ntBASIC20.87■□□□□ 0.93
StrcQ8VIM6 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC20.87■□□□□ 0.93
StrcQ8VIM6 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
StrcQ8VIM6 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC20.87■□□□□ 0.93
StrcQ8VIM6 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
StrcQ8VIM6 Phf7-203ENSMUST00000226565 1971 ntBASIC20.86■□□□□ 0.93
StrcQ8VIM6 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
StrcQ8VIM6 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
StrcQ8VIM6 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
StrcQ8VIM6 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC20.86■□□□□ 0.93
StrcQ8VIM6 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
StrcQ8VIM6 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
StrcQ8VIM6 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC20.86■□□□□ 0.93
StrcQ8VIM6 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
StrcQ8VIM6 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
StrcQ8VIM6 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
StrcQ8VIM6 Gm13186-201ENSMUST00000118031 316 ntBASIC20.85■□□□□ 0.93
StrcQ8VIM6 Gm11779-201ENSMUST00000118541 368 ntBASIC20.85■□□□□ 0.93
StrcQ8VIM6 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
StrcQ8VIM6 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC20.85■□□□□ 0.93
StrcQ8VIM6 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
StrcQ8VIM6 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
StrcQ8VIM6 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC20.85■□□□□ 0.93
StrcQ8VIM6 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
StrcQ8VIM6 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
StrcQ8VIM6 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
StrcQ8VIM6 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
StrcQ8VIM6 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
StrcQ8VIM6 Gm1401-201ENSMUST00000122048 772 ntBASIC20.85■□□□□ 0.93
StrcQ8VIM6 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC20.85■□□□□ 0.93
StrcQ8VIM6 Gm18421-201ENSMUST00000204122 625 ntBASIC20.85■□□□□ 0.93
StrcQ8VIM6 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
StrcQ8VIM6 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
StrcQ8VIM6 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
StrcQ8VIM6 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
StrcQ8VIM6 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
StrcQ8VIM6 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC20.84■□□□□ 0.93
StrcQ8VIM6 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
StrcQ8VIM6 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC20.84■□□□□ 0.93
StrcQ8VIM6 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
StrcQ8VIM6 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
StrcQ8VIM6 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
StrcQ8VIM6 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
StrcQ8VIM6 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
StrcQ8VIM6 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
StrcQ8VIM6 AC153794.1-201ENSMUST00000169148 126 ntBASIC20.83■□□□□ 0.93
StrcQ8VIM6 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
StrcQ8VIM6 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
StrcQ8VIM6 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
StrcQ8VIM6 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC20.83■□□□□ 0.93
StrcQ8VIM6 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
StrcQ8VIM6 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC20.83■□□□□ 0.92
StrcQ8VIM6 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
StrcQ8VIM6 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC20.83■□□□□ 0.92
StrcQ8VIM6 Gm12350-201ENSMUST00000121208 462 ntBASIC20.83■□□□□ 0.92
StrcQ8VIM6 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
StrcQ8VIM6 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC20.83■□□□□ 0.92
StrcQ8VIM6 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
StrcQ8VIM6 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
StrcQ8VIM6 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
StrcQ8VIM6 Gm43272-201ENSMUST00000200599 1584 ntBASIC20.82■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms