Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
TraipQ8VIG6 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TraipQ8VIG6 Gm25016-201ENSMUST00000158399 131 ntBASIC18.54■□□□□ 0.56
TraipQ8VIG6 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC18.54■□□□□ 0.56
TraipQ8VIG6 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
TraipQ8VIG6 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
TraipQ8VIG6 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TraipQ8VIG6 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.54■□□□□ 0.56
TraipQ8VIG6 Fst-202ENSMUST00000223640 2612 ntBASIC18.53■□□□□ 0.56
TraipQ8VIG6 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
TraipQ8VIG6 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TraipQ8VIG6 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
TraipQ8VIG6 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
TraipQ8VIG6 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
TraipQ8VIG6 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
TraipQ8VIG6 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TraipQ8VIG6 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TraipQ8VIG6 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
TraipQ8VIG6 Gm27389-201ENSMUST00000183622 195 ntBASIC18.53■□□□□ 0.56
TraipQ8VIG6 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC18.53■□□□□ 0.56
TraipQ8VIG6 Gm21559-201ENSMUST00000220638 855 ntBASIC18.53■□□□□ 0.56
TraipQ8VIG6 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TraipQ8VIG6 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
TraipQ8VIG6 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC18.53■□□□□ 0.56
TraipQ8VIG6 Gm8587-201ENSMUST00000076538 843 ntBASIC18.53■□□□□ 0.56
TraipQ8VIG6 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.53■□□□□ 0.56
TraipQ8VIG6 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TraipQ8VIG6 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TraipQ8VIG6 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TraipQ8VIG6 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TraipQ8VIG6 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TraipQ8VIG6 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TraipQ8VIG6 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TraipQ8VIG6 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TraipQ8VIG6 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
TraipQ8VIG6 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC18.52■□□□□ 0.56
TraipQ8VIG6 Gm6345-202ENSMUST00000180900 204 ntBASIC18.52■□□□□ 0.56
TraipQ8VIG6 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TraipQ8VIG6 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TraipQ8VIG6 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TraipQ8VIG6 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC18.52■□□□□ 0.55
TraipQ8VIG6 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
TraipQ8VIG6 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TraipQ8VIG6 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TraipQ8VIG6 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TraipQ8VIG6 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TraipQ8VIG6 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TraipQ8VIG6 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
TraipQ8VIG6 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TraipQ8VIG6 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC18.51■□□□□ 0.55
TraipQ8VIG6 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC18.51■□□□□ 0.55
TraipQ8VIG6 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TraipQ8VIG6 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
TraipQ8VIG6 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TraipQ8VIG6 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TraipQ8VIG6 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TraipQ8VIG6 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TraipQ8VIG6 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TraipQ8VIG6 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
TraipQ8VIG6 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
TraipQ8VIG6 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
TraipQ8VIG6 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TraipQ8VIG6 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TraipQ8VIG6 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TraipQ8VIG6 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
TraipQ8VIG6 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TraipQ8VIG6 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TraipQ8VIG6 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
TraipQ8VIG6 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TraipQ8VIG6 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TraipQ8VIG6 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TraipQ8VIG6 Gm7213-201ENSMUST00000215977 950 ntBASIC18.5■□□□□ 0.55
TraipQ8VIG6 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TraipQ8VIG6 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TraipQ8VIG6 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TraipQ8VIG6 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TraipQ8VIG6 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TraipQ8VIG6 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TraipQ8VIG6 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
TraipQ8VIG6 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TraipQ8VIG6 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TraipQ8VIG6 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TraipQ8VIG6 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TraipQ8VIG6 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TraipQ8VIG6 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TraipQ8VIG6 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.49■□□□□ 0.55
TraipQ8VIG6 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TraipQ8VIG6 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TraipQ8VIG6 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TraipQ8VIG6 Gm9013-201ENSMUST00000132939 882 ntBASIC18.49■□□□□ 0.55
TraipQ8VIG6 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC18.49■□□□□ 0.55
TraipQ8VIG6 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TraipQ8VIG6 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
TraipQ8VIG6 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.49■□□□□ 0.55
TraipQ8VIG6 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TraipQ8VIG6 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TraipQ8VIG6 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
TraipQ8VIG6 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
TraipQ8VIG6 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TraipQ8VIG6 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms