Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rab40cQ8VHQ4 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rab40cQ8VHQ4 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rab40cQ8VHQ4 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rab40cQ8VHQ4 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rab40cQ8VHQ4 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Rab40cQ8VHQ4 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rab40cQ8VHQ4 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rab40cQ8VHQ4 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rab40cQ8VHQ4 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rab40cQ8VHQ4 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC14.26□□□□□ -0.13
Rab40cQ8VHQ4 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rab40cQ8VHQ4 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rab40cQ8VHQ4 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rab40cQ8VHQ4 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rab40cQ8VHQ4 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rab40cQ8VHQ4 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rab40cQ8VHQ4 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC14.26□□□□□ -0.13
Rab40cQ8VHQ4 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rab40cQ8VHQ4 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rab40cQ8VHQ4 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Rab40cQ8VHQ4 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rab40cQ8VHQ4 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Rab40cQ8VHQ4 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rab40cQ8VHQ4 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rab40cQ8VHQ4 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rab40cQ8VHQ4 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rab40cQ8VHQ4 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rab40cQ8VHQ4 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rab40cQ8VHQ4 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rab40cQ8VHQ4 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rab40cQ8VHQ4 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rab40cQ8VHQ4 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rab40cQ8VHQ4 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rab40cQ8VHQ4 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rab40cQ8VHQ4 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rab40cQ8VHQ4 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
Rab40cQ8VHQ4 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC14.25□□□□□ -0.13
Rab40cQ8VHQ4 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rab40cQ8VHQ4 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rab40cQ8VHQ4 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC14.25□□□□□ -0.13
Rab40cQ8VHQ4 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rab40cQ8VHQ4 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Rab40cQ8VHQ4 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC14.25□□□□□ -0.13
Rab40cQ8VHQ4 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC14.25□□□□□ -0.13
Rab40cQ8VHQ4 Gm21168-201ENSMUST00000199646 1096 ntBASIC14.25□□□□□ -0.13
Rab40cQ8VHQ4 Gm43060-201ENSMUST00000200621 289 ntBASIC14.25□□□□□ -0.13
Rab40cQ8VHQ4 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rab40cQ8VHQ4 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Rab40cQ8VHQ4 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rab40cQ8VHQ4 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rab40cQ8VHQ4 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rab40cQ8VHQ4 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rab40cQ8VHQ4 AC131586.2-201ENSMUST00000228370 1512 ntBASIC14.25□□□□□ -0.13
Rab40cQ8VHQ4 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rab40cQ8VHQ4 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rab40cQ8VHQ4 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rab40cQ8VHQ4 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rab40cQ8VHQ4 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rab40cQ8VHQ4 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rab40cQ8VHQ4 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rab40cQ8VHQ4 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rab40cQ8VHQ4 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rab40cQ8VHQ4 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC14.24□□□□□ -0.13
Rab40cQ8VHQ4 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rab40cQ8VHQ4 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rab40cQ8VHQ4 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rab40cQ8VHQ4 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rab40cQ8VHQ4 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC14.24□□□□□ -0.13
Rab40cQ8VHQ4 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rab40cQ8VHQ4 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC14.24□□□□□ -0.13
Rab40cQ8VHQ4 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rab40cQ8VHQ4 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Rab40cQ8VHQ4 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rab40cQ8VHQ4 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Rab40cQ8VHQ4 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Rab40cQ8VHQ4 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC14.24□□□□□ -0.13
Rab40cQ8VHQ4 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rab40cQ8VHQ4 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rab40cQ8VHQ4 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rab40cQ8VHQ4 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rab40cQ8VHQ4 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rab40cQ8VHQ4 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Rab40cQ8VHQ4 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rab40cQ8VHQ4 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rab40cQ8VHQ4 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rab40cQ8VHQ4 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rab40cQ8VHQ4 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rab40cQ8VHQ4 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC14.23□□□□□ -0.13
Rab40cQ8VHQ4 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rab40cQ8VHQ4 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rab40cQ8VHQ4 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rab40cQ8VHQ4 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rab40cQ8VHQ4 Gm9988-201ENSMUST00000069786 435 ntBASIC14.23□□□□□ -0.13
Rab40cQ8VHQ4 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rab40cQ8VHQ4 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rab40cQ8VHQ4 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rab40cQ8VHQ4 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rab40cQ8VHQ4 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rab40cQ8VHQ4 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms