Protein–RNA interactions for Protein: Q8VHP8

Rab40b, Ras-related protein Rab-40B, mousemouse

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40bQ8VHP8 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Rab40bQ8VHP8 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Rab40bQ8VHP8 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC15.71■□□□□ 0.1
Rab40bQ8VHP8 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Rab40bQ8VHP8 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
Rab40bQ8VHP8 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
Rab40bQ8VHP8 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC15.71■□□□□ 0.1
Rab40bQ8VHP8 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC15.71■□□□□ 0.1
Rab40bQ8VHP8 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rab40bQ8VHP8 Gm43272-201ENSMUST00000200599 1584 ntBASIC15.7■□□□□ 0.1
Rab40bQ8VHP8 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rab40bQ8VHP8 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rab40bQ8VHP8 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Rab40bQ8VHP8 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Rab40bQ8VHP8 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rab40bQ8VHP8 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC15.7■□□□□ 0.1
Rab40bQ8VHP8 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rab40bQ8VHP8 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC15.7■□□□□ 0.1
Rab40bQ8VHP8 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rab40bQ8VHP8 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rab40bQ8VHP8 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rab40bQ8VHP8 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rab40bQ8VHP8 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rab40bQ8VHP8 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rab40bQ8VHP8 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rab40bQ8VHP8 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rab40bQ8VHP8 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rab40bQ8VHP8 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rab40bQ8VHP8 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Rab40bQ8VHP8 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rab40bQ8VHP8 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rab40bQ8VHP8 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rab40bQ8VHP8 Gm37166-201ENSMUST00000195473 2474 ntBASIC15.69■□□□□ 0.1
Rab40bQ8VHP8 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Rab40bQ8VHP8 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rab40bQ8VHP8 Gm13216-201ENSMUST00000117145 591 ntBASIC15.69■□□□□ 0.1
Rab40bQ8VHP8 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Rab40bQ8VHP8 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rab40bQ8VHP8 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rab40bQ8VHP8 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rab40bQ8VHP8 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rab40bQ8VHP8 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC15.69■□□□□ 0.1
Rab40bQ8VHP8 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rab40bQ8VHP8 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rab40bQ8VHP8 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Rab40bQ8VHP8 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rab40bQ8VHP8 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rab40bQ8VHP8 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rab40bQ8VHP8 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rab40bQ8VHP8 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Rab40bQ8VHP8 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rab40bQ8VHP8 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rab40bQ8VHP8 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Rab40bQ8VHP8 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rab40bQ8VHP8 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC15.68■□□□□ 0.1
Rab40bQ8VHP8 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
Rab40bQ8VHP8 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Rab40bQ8VHP8 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Rab40bQ8VHP8 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rab40bQ8VHP8 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC15.68■□□□□ 0.1
Rab40bQ8VHP8 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rab40bQ8VHP8 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rab40bQ8VHP8 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rab40bQ8VHP8 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rab40bQ8VHP8 AC108858.1-201ENSMUST00000228461 1498 ntBASIC15.67■□□□□ 0.1
Rab40bQ8VHP8 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rab40bQ8VHP8 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC15.67■□□□□ 0.1
Rab40bQ8VHP8 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC15.67■□□□□ 0.1
Rab40bQ8VHP8 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rab40bQ8VHP8 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC15.67■□□□□ 0.1
Rab40bQ8VHP8 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rab40bQ8VHP8 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rab40bQ8VHP8 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rab40bQ8VHP8 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rab40bQ8VHP8 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC15.66■□□□□ 0.1
Rab40bQ8VHP8 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Rab40bQ8VHP8 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rab40bQ8VHP8 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Rab40bQ8VHP8 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Rab40bQ8VHP8 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rab40bQ8VHP8 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC15.66■□□□□ 0.1
Rab40bQ8VHP8 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Rab40bQ8VHP8 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Rab40bQ8VHP8 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Rab40bQ8VHP8 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rab40bQ8VHP8 Gm38285-201ENSMUST00000192928 922 ntBASIC15.66■□□□□ 0.1
Rab40bQ8VHP8 Gm42778-201ENSMUST00000199644 553 ntBASIC15.66■□□□□ 0.1
Rab40bQ8VHP8 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rab40bQ8VHP8 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rab40bQ8VHP8 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rab40bQ8VHP8 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Rab40bQ8VHP8 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Rab40bQ8VHP8 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rab40bQ8VHP8 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rab40bQ8VHP8 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rab40bQ8VHP8 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rab40bQ8VHP8 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rab40bQ8VHP8 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rab40bQ8VHP8 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rab40bQ8VHP8 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms