Protein–RNA interactions for Protein: Q8VEJ9

Vps4a, Vacuolar protein sorting-associated protein 4A, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4aQ8VEJ9 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vps4aQ8VEJ9 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Vps4aQ8VEJ9 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vps4aQ8VEJ9 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
Vps4aQ8VEJ9 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vps4aQ8VEJ9 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vps4aQ8VEJ9 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vps4aQ8VEJ9 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vps4aQ8VEJ9 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vps4aQ8VEJ9 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Vps4aQ8VEJ9 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vps4aQ8VEJ9 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vps4aQ8VEJ9 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Vps4aQ8VEJ9 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Vps4aQ8VEJ9 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vps4aQ8VEJ9 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Vps4aQ8VEJ9 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Vps4aQ8VEJ9 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Vps4aQ8VEJ9 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Vps4aQ8VEJ9 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vps4aQ8VEJ9 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Vps4aQ8VEJ9 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Vps4aQ8VEJ9 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Vps4aQ8VEJ9 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vps4aQ8VEJ9 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vps4aQ8VEJ9 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vps4aQ8VEJ9 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vps4aQ8VEJ9 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vps4aQ8VEJ9 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vps4aQ8VEJ9 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.88■□□□□ 0.29
Vps4aQ8VEJ9 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC16.87■□□□□ 0.29
Vps4aQ8VEJ9 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps4aQ8VEJ9 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps4aQ8VEJ9 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps4aQ8VEJ9 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps4aQ8VEJ9 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Vps4aQ8VEJ9 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps4aQ8VEJ9 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps4aQ8VEJ9 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps4aQ8VEJ9 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps4aQ8VEJ9 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps4aQ8VEJ9 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Vps4aQ8VEJ9 Gm11643-201ENSMUST00000119578 864 ntBASIC16.87■□□□□ 0.29
Vps4aQ8VEJ9 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Vps4aQ8VEJ9 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps4aQ8VEJ9 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps4aQ8VEJ9 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps4aQ8VEJ9 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps4aQ8VEJ9 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Vps4aQ8VEJ9 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps4aQ8VEJ9 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vps4aQ8VEJ9 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vps4aQ8VEJ9 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vps4aQ8VEJ9 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Vps4aQ8VEJ9 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC16.86■□□□□ 0.29
Vps4aQ8VEJ9 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vps4aQ8VEJ9 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC16.86■□□□□ 0.29
Vps4aQ8VEJ9 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC16.86■□□□□ 0.29
Vps4aQ8VEJ9 Gm18666-201ENSMUST00000190039 958 ntBASIC16.86■□□□□ 0.29
Vps4aQ8VEJ9 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC16.86■□□□□ 0.29
Vps4aQ8VEJ9 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vps4aQ8VEJ9 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vps4aQ8VEJ9 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vps4aQ8VEJ9 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Vps4aQ8VEJ9 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.85■□□□□ 0.29
Vps4aQ8VEJ9 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Vps4aQ8VEJ9 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Vps4aQ8VEJ9 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vps4aQ8VEJ9 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vps4aQ8VEJ9 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vps4aQ8VEJ9 Gm15565-201ENSMUST00000118890 427 ntBASIC16.85■□□□□ 0.29
Vps4aQ8VEJ9 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Vps4aQ8VEJ9 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Vps4aQ8VEJ9 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vps4aQ8VEJ9 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Vps4aQ8VEJ9 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Vps4aQ8VEJ9 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vps4aQ8VEJ9 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vps4aQ8VEJ9 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vps4aQ8VEJ9 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vps4aQ8VEJ9 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vps4aQ8VEJ9 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vps4aQ8VEJ9 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.85■□□□□ 0.29
Vps4aQ8VEJ9 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vps4aQ8VEJ9 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vps4aQ8VEJ9 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vps4aQ8VEJ9 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vps4aQ8VEJ9 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vps4aQ8VEJ9 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vps4aQ8VEJ9 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Vps4aQ8VEJ9 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vps4aQ8VEJ9 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Vps4aQ8VEJ9 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.84■□□□□ 0.29
Vps4aQ8VEJ9 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vps4aQ8VEJ9 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vps4aQ8VEJ9 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Vps4aQ8VEJ9 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Vps4aQ8VEJ9 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vps4aQ8VEJ9 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vps4aQ8VEJ9 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.84■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms