Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
Rprd1aQ8VDS4 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.93■□□□□ 0.46
Rprd1aQ8VDS4 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.93■□□□□ 0.46
Rprd1aQ8VDS4 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rprd1aQ8VDS4 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rprd1aQ8VDS4 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rprd1aQ8VDS4 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rprd1aQ8VDS4 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rprd1aQ8VDS4 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rprd1aQ8VDS4 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Rprd1aQ8VDS4 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Rprd1aQ8VDS4 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rprd1aQ8VDS4 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.92■□□□□ 0.46
Rprd1aQ8VDS4 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rprd1aQ8VDS4 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Rprd1aQ8VDS4 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rprd1aQ8VDS4 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rprd1aQ8VDS4 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rprd1aQ8VDS4 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.92■□□□□ 0.46
Rprd1aQ8VDS4 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rprd1aQ8VDS4 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.92■□□□□ 0.46
Rprd1aQ8VDS4 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rprd1aQ8VDS4 Gm5417-201ENSMUST00000079706 384 ntBASIC17.92■□□□□ 0.46
Rprd1aQ8VDS4 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rprd1aQ8VDS4 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
Rprd1aQ8VDS4 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rprd1aQ8VDS4 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.92■□□□□ 0.46
Rprd1aQ8VDS4 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rprd1aQ8VDS4 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rprd1aQ8VDS4 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Rprd1aQ8VDS4 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Rprd1aQ8VDS4 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rprd1aQ8VDS4 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rprd1aQ8VDS4 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.91■□□□□ 0.46
Rprd1aQ8VDS4 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Rprd1aQ8VDS4 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Rprd1aQ8VDS4 Gm12085-201ENSMUST00000119263 940 ntBASIC17.91■□□□□ 0.46
Rprd1aQ8VDS4 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Rprd1aQ8VDS4 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.91■□□□□ 0.46
Rprd1aQ8VDS4 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Rprd1aQ8VDS4 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Rprd1aQ8VDS4 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rprd1aQ8VDS4 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rprd1aQ8VDS4 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rprd1aQ8VDS4 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Rprd1aQ8VDS4 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rprd1aQ8VDS4 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rprd1aQ8VDS4 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Rprd1aQ8VDS4 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rprd1aQ8VDS4 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.9■□□□□ 0.46
Rprd1aQ8VDS4 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rprd1aQ8VDS4 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rprd1aQ8VDS4 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Rprd1aQ8VDS4 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Rprd1aQ8VDS4 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Rprd1aQ8VDS4 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.9■□□□□ 0.46
Rprd1aQ8VDS4 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Rprd1aQ8VDS4 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.9■□□□□ 0.46
Rprd1aQ8VDS4 Odf3b-204ENSMUST00000227834 930 ntBASIC17.9■□□□□ 0.46
Rprd1aQ8VDS4 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rprd1aQ8VDS4 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rprd1aQ8VDS4 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rprd1aQ8VDS4 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rprd1aQ8VDS4 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rprd1aQ8VDS4 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rprd1aQ8VDS4 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Rprd1aQ8VDS4 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
Rprd1aQ8VDS4 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Rprd1aQ8VDS4 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rprd1aQ8VDS4 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rprd1aQ8VDS4 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Rprd1aQ8VDS4 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rprd1aQ8VDS4 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Rprd1aQ8VDS4 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Rprd1aQ8VDS4 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rprd1aQ8VDS4 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC17.89■□□□□ 0.45
Rprd1aQ8VDS4 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.89■□□□□ 0.45
Rprd1aQ8VDS4 Gm21814-202ENSMUST00000203277 873 ntBASIC17.89■□□□□ 0.45
Rprd1aQ8VDS4 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rprd1aQ8VDS4 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Rprd1aQ8VDS4 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rprd1aQ8VDS4 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.89■□□□□ 0.45
Rprd1aQ8VDS4 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Rprd1aQ8VDS4 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rprd1aQ8VDS4 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.89■□□□□ 0.45
Rprd1aQ8VDS4 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rprd1aQ8VDS4 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rprd1aQ8VDS4 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Rprd1aQ8VDS4 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Rprd1aQ8VDS4 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.88■□□□□ 0.45
Rprd1aQ8VDS4 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.88■□□□□ 0.45
Rprd1aQ8VDS4 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Rprd1aQ8VDS4 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rprd1aQ8VDS4 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Rprd1aQ8VDS4 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Rprd1aQ8VDS4 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Rprd1aQ8VDS4 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rprd1aQ8VDS4 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rprd1aQ8VDS4 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rprd1aQ8VDS4 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms