Protein–RNA interactions for Protein: Q8VDP2

UPF0428 protein CXorf56 homolog, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8VDP2 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Q8VDP2 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Q8VDP2 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Q8VDP2 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Q8VDP2 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Q8VDP2 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.03■□□□□ 0.32
Q8VDP2 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.03■□□□□ 0.32
Q8VDP2 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC17.03■□□□□ 0.32
Q8VDP2 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Q8VDP2 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Q8VDP2 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Q8VDP2 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Q8VDP2 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC17.03■□□□□ 0.32
Q8VDP2 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Q8VDP2 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC17.03■□□□□ 0.32
Q8VDP2 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Q8VDP2 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Q8VDP2 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Q8VDP2 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Q8VDP2 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Q8VDP2 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Q8VDP2 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Q8VDP2 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Q8VDP2 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Q8VDP2 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Q8VDP2 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Q8VDP2 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Q8VDP2 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
Q8VDP2 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Q8VDP2 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Q8VDP2 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Q8VDP2 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Q8VDP2 Gm45546-201ENSMUST00000211053 2394 ntBASIC17.02■□□□□ 0.31
Q8VDP2 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Q8VDP2 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Q8VDP2 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Q8VDP2 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Q8VDP2 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Q8VDP2 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.01■□□□□ 0.31
Q8VDP2 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Q8VDP2 Gm10620-201ENSMUST00000098379 1332 ntBASIC17.01■□□□□ 0.31
Q8VDP2 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Q8VDP2 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Q8VDP2 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Q8VDP2 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Q8VDP2 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC17.01■□□□□ 0.31
Q8VDP2 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC17.01■□□□□ 0.31
Q8VDP2 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC17.01■□□□□ 0.31
Q8VDP2 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Q8VDP2 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Q8VDP2 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Q8VDP2 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
Q8VDP2 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Q8VDP2 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Q8VDP2 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Q8VDP2 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Q8VDP2 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Q8VDP2 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Q8VDP2 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Q8VDP2 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
Q8VDP2 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17■□□□□ 0.31
Q8VDP2 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Q8VDP2 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Q8VDP2 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC17■□□□□ 0.31
Q8VDP2 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Q8VDP2 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Q8VDP2 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC17■□□□□ 0.31
Q8VDP2 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Q8VDP2 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Q8VDP2 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Q8VDP2 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Q8VDP2 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
Q8VDP2 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC17■□□□□ 0.31
Q8VDP2 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Q8VDP2 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Q8VDP2 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Q8VDP2 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Q8VDP2 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17■□□□□ 0.31
Q8VDP2 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Q8VDP2 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Q8VDP2 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Q8VDP2 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Q8VDP2 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC16.99■□□□□ 0.31
Q8VDP2 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Q8VDP2 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
Q8VDP2 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Q8VDP2 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Q8VDP2 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC16.99■□□□□ 0.31
Q8VDP2 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Q8VDP2 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Q8VDP2 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Q8VDP2 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Q8VDP2 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC16.99■□□□□ 0.31
Q8VDP2 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Q8VDP2 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Q8VDP2 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Q8VDP2 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Q8VDP2 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Q8VDP2 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.98■□□□□ 0.31
Q8VDP2 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms