Protein–RNA interactions for Protein: Q8VCQ6

Sgms1, Phosphatidylcholine:ceramide cholinephosphotransferase 1, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sgms1Q8VCQ6 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Sgms1Q8VCQ6 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Sgms1Q8VCQ6 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sgms1Q8VCQ6 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sgms1Q8VCQ6 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sgms1Q8VCQ6 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC18.82■□□□□ 0.6
Sgms1Q8VCQ6 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sgms1Q8VCQ6 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Sgms1Q8VCQ6 Gm5643-201ENSMUST00000117081 966 ntBASIC18.82■□□□□ 0.6
Sgms1Q8VCQ6 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Sgms1Q8VCQ6 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Sgms1Q8VCQ6 Gm4974-201ENSMUST00000209974 875 ntBASIC18.82■□□□□ 0.6
Sgms1Q8VCQ6 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Sgms1Q8VCQ6 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sgms1Q8VCQ6 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sgms1Q8VCQ6 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Sgms1Q8VCQ6 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Sgms1Q8VCQ6 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Sgms1Q8VCQ6 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sgms1Q8VCQ6 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sgms1Q8VCQ6 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sgms1Q8VCQ6 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sgms1Q8VCQ6 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Sgms1Q8VCQ6 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sgms1Q8VCQ6 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sgms1Q8VCQ6 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sgms1Q8VCQ6 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sgms1Q8VCQ6 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Sgms1Q8VCQ6 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sgms1Q8VCQ6 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sgms1Q8VCQ6 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
Sgms1Q8VCQ6 Gm12382-201ENSMUST00000122005 922 ntBASIC18.81■□□□□ 0.6
Sgms1Q8VCQ6 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC18.81■□□□□ 0.6
Sgms1Q8VCQ6 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.81■□□□□ 0.6
Sgms1Q8VCQ6 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC18.81■□□□□ 0.6
Sgms1Q8VCQ6 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sgms1Q8VCQ6 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sgms1Q8VCQ6 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sgms1Q8VCQ6 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC18.81■□□□□ 0.6
Sgms1Q8VCQ6 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sgms1Q8VCQ6 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
Sgms1Q8VCQ6 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sgms1Q8VCQ6 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sgms1Q8VCQ6 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sgms1Q8VCQ6 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Sgms1Q8VCQ6 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Sgms1Q8VCQ6 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC18.8■□□□□ 0.6
Sgms1Q8VCQ6 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC18.8■□□□□ 0.6
Sgms1Q8VCQ6 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sgms1Q8VCQ6 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sgms1Q8VCQ6 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Sgms1Q8VCQ6 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sgms1Q8VCQ6 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sgms1Q8VCQ6 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.79■□□□□ 0.6
Sgms1Q8VCQ6 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Sgms1Q8VCQ6 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sgms1Q8VCQ6 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sgms1Q8VCQ6 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sgms1Q8VCQ6 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.79■□□□□ 0.6
Sgms1Q8VCQ6 Gm43183-201ENSMUST00000200632 547 ntBASIC18.79■□□□□ 0.6
Sgms1Q8VCQ6 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sgms1Q8VCQ6 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sgms1Q8VCQ6 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sgms1Q8VCQ6 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sgms1Q8VCQ6 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sgms1Q8VCQ6 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sgms1Q8VCQ6 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Sgms1Q8VCQ6 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sgms1Q8VCQ6 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC18.78■□□□□ 0.6
Sgms1Q8VCQ6 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Sgms1Q8VCQ6 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Sgms1Q8VCQ6 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.78■□□□□ 0.6
Sgms1Q8VCQ6 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Sgms1Q8VCQ6 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sgms1Q8VCQ6 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sgms1Q8VCQ6 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sgms1Q8VCQ6 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sgms1Q8VCQ6 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sgms1Q8VCQ6 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sgms1Q8VCQ6 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sgms1Q8VCQ6 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sgms1Q8VCQ6 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sgms1Q8VCQ6 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sgms1Q8VCQ6 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sgms1Q8VCQ6 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC18.77■□□□□ 0.6
Sgms1Q8VCQ6 Gm13181-201ENSMUST00000120117 1069 ntBASIC18.77■□□□□ 0.6
Sgms1Q8VCQ6 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.77■□□□□ 0.6
Sgms1Q8VCQ6 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC18.77■□□□□ 0.6
Sgms1Q8VCQ6 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sgms1Q8VCQ6 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sgms1Q8VCQ6 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sgms1Q8VCQ6 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sgms1Q8VCQ6 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Sgms1Q8VCQ6 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Sgms1Q8VCQ6 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Sgms1Q8VCQ6 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Sgms1Q8VCQ6 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC18.76■□□□□ 0.59
Sgms1Q8VCQ6 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sgms1Q8VCQ6 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC18.76■□□□□ 0.59
Sgms1Q8VCQ6 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms