Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Rpap2Q8VC34 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Rpap2Q8VC34 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rpap2Q8VC34 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rpap2Q8VC34 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rpap2Q8VC34 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rpap2Q8VC34 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Rpap2Q8VC34 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Rpap2Q8VC34 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Rpap2Q8VC34 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rpap2Q8VC34 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
Rpap2Q8VC34 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC19.11■□□□□ 0.65
Rpap2Q8VC34 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Rpap2Q8VC34 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC19.11■□□□□ 0.65
Rpap2Q8VC34 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rpap2Q8VC34 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rpap2Q8VC34 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Rpap2Q8VC34 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rpap2Q8VC34 Gm10461-201ENSMUST00000202073 4786 ntBASIC19.11■□□□□ 0.65
Rpap2Q8VC34 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Rpap2Q8VC34 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Rpap2Q8VC34 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rpap2Q8VC34 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Rpap2Q8VC34 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rpap2Q8VC34 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rpap2Q8VC34 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rpap2Q8VC34 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rpap2Q8VC34 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rpap2Q8VC34 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Rpap2Q8VC34 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Rpap2Q8VC34 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rpap2Q8VC34 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rpap2Q8VC34 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rpap2Q8VC34 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rpap2Q8VC34 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Rpap2Q8VC34 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC19.1■□□□□ 0.65
Rpap2Q8VC34 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Rpap2Q8VC34 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC19.1■□□□□ 0.65
Rpap2Q8VC34 Gm37519-201ENSMUST00000191687 2210 ntBASIC19.1■□□□□ 0.65
Rpap2Q8VC34 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rpap2Q8VC34 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rpap2Q8VC34 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rpap2Q8VC34 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rpap2Q8VC34 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rpap2Q8VC34 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Rpap2Q8VC34 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rpap2Q8VC34 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC19.09■□□□□ 0.65
Rpap2Q8VC34 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC19.09■□□□□ 0.65
Rpap2Q8VC34 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rpap2Q8VC34 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rpap2Q8VC34 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rpap2Q8VC34 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Rpap2Q8VC34 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Rpap2Q8VC34 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Rpap2Q8VC34 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Rpap2Q8VC34 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
Rpap2Q8VC34 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rpap2Q8VC34 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Rpap2Q8VC34 AC122335.2-201ENSMUST00000213901 6181 ntBASIC19.08■□□□□ 0.65
Rpap2Q8VC34 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Rpap2Q8VC34 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Rpap2Q8VC34 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Rpap2Q8VC34 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Rpap2Q8VC34 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC19.08■□□□□ 0.64
Rpap2Q8VC34 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Rpap2Q8VC34 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC19.08■□□□□ 0.64
Rpap2Q8VC34 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC19.08■□□□□ 0.64
Rpap2Q8VC34 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC19.08■□□□□ 0.64
Rpap2Q8VC34 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC19.08■□□□□ 0.64
Rpap2Q8VC34 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC19.08■□□□□ 0.64
Rpap2Q8VC34 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rpap2Q8VC34 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rpap2Q8VC34 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC19.08■□□□□ 0.64
Rpap2Q8VC34 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.64
Rpap2Q8VC34 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rpap2Q8VC34 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Rpap2Q8VC34 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC19.07■□□□□ 0.64
Rpap2Q8VC34 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rpap2Q8VC34 Gm43808-201ENSMUST00000202534 2065 ntBASIC19.07■□□□□ 0.64
Rpap2Q8VC34 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rpap2Q8VC34 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC19.07■□□□□ 0.64
Rpap2Q8VC34 Gm715-201ENSMUST00000117865 831 ntBASIC19.07■□□□□ 0.64
Rpap2Q8VC34 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Rpap2Q8VC34 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC19.07■□□□□ 0.64
Rpap2Q8VC34 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
Rpap2Q8VC34 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Rpap2Q8VC34 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC19.07■□□□□ 0.64
Rpap2Q8VC34 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC19.07■□□□□ 0.64
Rpap2Q8VC34 Gm16042-201ENSMUST00000204813 1247 ntBASIC19.07■□□□□ 0.64
Rpap2Q8VC34 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rpap2Q8VC34 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Rpap2Q8VC34 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rpap2Q8VC34 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rpap2Q8VC34 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rpap2Q8VC34 Gm42900-201ENSMUST00000197184 2167 ntBASIC19.07■□□□□ 0.64
Rpap2Q8VC34 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC19.07■□□□□ 0.64
Rpap2Q8VC34 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rpap2Q8VC34 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Rpap2Q8VC34 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rpap2Q8VC34 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms