Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vps39Q8R5L3 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vps39Q8R5L3 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vps39Q8R5L3 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vps39Q8R5L3 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vps39Q8R5L3 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vps39Q8R5L3 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vps39Q8R5L3 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vps39Q8R5L3 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vps39Q8R5L3 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vps39Q8R5L3 Gm10138-203ENSMUST00000206952 366 ntBASIC17.47■□□□□ 0.39
Vps39Q8R5L3 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vps39Q8R5L3 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vps39Q8R5L3 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Vps39Q8R5L3 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vps39Q8R5L3 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.47■□□□□ 0.39
Vps39Q8R5L3 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vps39Q8R5L3 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vps39Q8R5L3 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Vps39Q8R5L3 Gm43859-201ENSMUST00000200075 1412 ntBASIC17.47■□□□□ 0.39
Vps39Q8R5L3 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vps39Q8R5L3 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vps39Q8R5L3 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vps39Q8R5L3 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.46■□□□□ 0.39
Vps39Q8R5L3 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC17.46■□□□□ 0.39
Vps39Q8R5L3 Mtag2-201ENSMUST00000058665 714 ntBASIC17.46■□□□□ 0.39
Vps39Q8R5L3 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Vps39Q8R5L3 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Vps39Q8R5L3 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vps39Q8R5L3 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Vps39Q8R5L3 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vps39Q8R5L3 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vps39Q8R5L3 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Vps39Q8R5L3 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Vps39Q8R5L3 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vps39Q8R5L3 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Vps39Q8R5L3 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Vps39Q8R5L3 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Vps39Q8R5L3 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.45■□□□□ 0.38
Vps39Q8R5L3 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Vps39Q8R5L3 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vps39Q8R5L3 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vps39Q8R5L3 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vps39Q8R5L3 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vps39Q8R5L3 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vps39Q8R5L3 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.45■□□□□ 0.38
Vps39Q8R5L3 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vps39Q8R5L3 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC17.44■□□□□ 0.38
Vps39Q8R5L3 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Vps39Q8R5L3 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vps39Q8R5L3 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vps39Q8R5L3 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Vps39Q8R5L3 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vps39Q8R5L3 Gm11643-201ENSMUST00000119578 864 ntBASIC17.44■□□□□ 0.38
Vps39Q8R5L3 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC17.44■□□□□ 0.38
Vps39Q8R5L3 AC164629.5-201ENSMUST00000220387 632 ntBASIC17.44■□□□□ 0.38
Vps39Q8R5L3 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vps39Q8R5L3 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Vps39Q8R5L3 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Vps39Q8R5L3 Dio3-201ENSMUST00000097228 1449 ntBASIC17.44■□□□□ 0.38
Vps39Q8R5L3 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Vps39Q8R5L3 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.44■□□□□ 0.38
Vps39Q8R5L3 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Vps39Q8R5L3 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vps39Q8R5L3 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.44■□□□□ 0.38
Vps39Q8R5L3 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vps39Q8R5L3 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Vps39Q8R5L3 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.43■□□□□ 0.38
Vps39Q8R5L3 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vps39Q8R5L3 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vps39Q8R5L3 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vps39Q8R5L3 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vps39Q8R5L3 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Vps39Q8R5L3 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.43■□□□□ 0.38
Vps39Q8R5L3 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Vps39Q8R5L3 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC17.43■□□□□ 0.38
Vps39Q8R5L3 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Vps39Q8R5L3 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vps39Q8R5L3 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vps39Q8R5L3 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vps39Q8R5L3 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Vps39Q8R5L3 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vps39Q8R5L3 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vps39Q8R5L3 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps39Q8R5L3 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps39Q8R5L3 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps39Q8R5L3 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps39Q8R5L3 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps39Q8R5L3 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps39Q8R5L3 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
Vps39Q8R5L3 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps39Q8R5L3 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.42■□□□□ 0.38
Vps39Q8R5L3 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps39Q8R5L3 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps39Q8R5L3 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps39Q8R5L3 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
Vps39Q8R5L3 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.42■□□□□ 0.38
Vps39Q8R5L3 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Vps39Q8R5L3 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps39Q8R5L3 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms