Protein–RNA interactions for Protein: Q8R429

Atp2a1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp2a1Q8R429 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Atp2a1Q8R429 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Atp2a1Q8R429 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Atp2a1Q8R429 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC19.48■□□□□ 0.71
Atp2a1Q8R429 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Atp2a1Q8R429 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Atp2a1Q8R429 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Atp2a1Q8R429 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Atp2a1Q8R429 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Atp2a1Q8R429 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Atp2a1Q8R429 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Atp2a1Q8R429 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Atp2a1Q8R429 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Atp2a1Q8R429 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Atp2a1Q8R429 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Atp2a1Q8R429 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Atp2a1Q8R429 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Atp2a1Q8R429 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Atp2a1Q8R429 Gm7638-201ENSMUST00000121348 967 ntBASIC19.47■□□□□ 0.71
Atp2a1Q8R429 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC19.47■□□□□ 0.71
Atp2a1Q8R429 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Atp2a1Q8R429 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Atp2a1Q8R429 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Atp2a1Q8R429 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Atp2a1Q8R429 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Atp2a1Q8R429 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Atp2a1Q8R429 Rarb-207ENSMUST00000225921 2756 ntBASIC19.47■□□□□ 0.71
Atp2a1Q8R429 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Atp2a1Q8R429 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Atp2a1Q8R429 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Atp2a1Q8R429 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Atp2a1Q8R429 Gm42939-201ENSMUST00000197514 2205 ntBASIC19.47■□□□□ 0.71
Atp2a1Q8R429 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Atp2a1Q8R429 Dmtn-207ENSMUST00000228001 2437 ntBASIC19.46■□□□□ 0.71
Atp2a1Q8R429 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Atp2a1Q8R429 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Atp2a1Q8R429 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC19.46■□□□□ 0.71
Atp2a1Q8R429 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Atp2a1Q8R429 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
Atp2a1Q8R429 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
Atp2a1Q8R429 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Atp2a1Q8R429 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Atp2a1Q8R429 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Atp2a1Q8R429 Gm10013-201ENSMUST00000106074 672 ntBASIC19.46■□□□□ 0.71
Atp2a1Q8R429 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Atp2a1Q8R429 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC19.46■□□□□ 0.71
Atp2a1Q8R429 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC19.46■□□□□ 0.71
Atp2a1Q8R429 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC19.46■□□□□ 0.71
Atp2a1Q8R429 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC19.46■□□□□ 0.71
Atp2a1Q8R429 Mir5130-201ENSMUST00000175160 84 ntBASIC19.46■□□□□ 0.71
Atp2a1Q8R429 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC19.46■□□□□ 0.71
Atp2a1Q8R429 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Atp2a1Q8R429 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Atp2a1Q8R429 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Atp2a1Q8R429 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Atp2a1Q8R429 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Atp2a1Q8R429 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Atp2a1Q8R429 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Atp2a1Q8R429 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
Atp2a1Q8R429 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Atp2a1Q8R429 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Atp2a1Q8R429 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Atp2a1Q8R429 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Atp2a1Q8R429 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Atp2a1Q8R429 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Atp2a1Q8R429 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Atp2a1Q8R429 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Atp2a1Q8R429 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Atp2a1Q8R429 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Atp2a1Q8R429 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Atp2a1Q8R429 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC19.45■□□□□ 0.7
Atp2a1Q8R429 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Atp2a1Q8R429 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Atp2a1Q8R429 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Atp2a1Q8R429 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Atp2a1Q8R429 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Atp2a1Q8R429 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atp2a1Q8R429 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atp2a1Q8R429 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atp2a1Q8R429 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atp2a1Q8R429 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Atp2a1Q8R429 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atp2a1Q8R429 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atp2a1Q8R429 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC19.44■□□□□ 0.7
Atp2a1Q8R429 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Atp2a1Q8R429 Gm4217-201ENSMUST00000182243 1002 ntBASIC19.44■□□□□ 0.7
Atp2a1Q8R429 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atp2a1Q8R429 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atp2a1Q8R429 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atp2a1Q8R429 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atp2a1Q8R429 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atp2a1Q8R429 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atp2a1Q8R429 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Atp2a1Q8R429 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Atp2a1Q8R429 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atp2a1Q8R429 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Atp2a1Q8R429 Fst-202ENSMUST00000223640 2612 ntBASIC19.43■□□□□ 0.7
Atp2a1Q8R429 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Atp2a1Q8R429 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Atp2a1Q8R429 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.43■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms