Protein–RNA interactions for Protein: Q8R3Z5

Cacnb1, Voltage-dependent L-type calcium channel subunit beta-1, mousemouse

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb1Q8R3Z5 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cacnb1Q8R3Z5 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cacnb1Q8R3Z5 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
Cacnb1Q8R3Z5 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Cacnb1Q8R3Z5 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cacnb1Q8R3Z5 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.54■□□□□ 0.72
Cacnb1Q8R3Z5 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC19.54■□□□□ 0.72
Cacnb1Q8R3Z5 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cacnb1Q8R3Z5 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cacnb1Q8R3Z5 Gm22709-201ENSMUST00000116893 111 ntBASIC19.54■□□□□ 0.72
Cacnb1Q8R3Z5 H2-K2-201ENSMUST00000174250 1049 ntBASIC19.54■□□□□ 0.72
Cacnb1Q8R3Z5 2310061N02Rik-201ENSMUST00000050882 794 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Cacnb1Q8R3Z5 Olfr1437-201ENSMUST00000052558 1177 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Cacnb1Q8R3Z5 Gm10271-201ENSMUST00000092165 156 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Cacnb1Q8R3Z5 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC19.54■□□□□ 0.72
Cacnb1Q8R3Z5 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cacnb1Q8R3Z5 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC19.54■□□□□ 0.72
Cacnb1Q8R3Z5 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Cacnb1Q8R3Z5 AC130831.1-201ENSMUST00000224546 1474 ntBASIC19.54■□□□□ 0.72
Cacnb1Q8R3Z5 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Cacnb1Q8R3Z5 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cacnb1Q8R3Z5 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cacnb1Q8R3Z5 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Cacnb1Q8R3Z5 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Cacnb1Q8R3Z5 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Cacnb1Q8R3Z5 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC19.53■□□□□ 0.72
Cacnb1Q8R3Z5 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cacnb1Q8R3Z5 Olfr1038-ps-201ENSMUST00000149775 1209 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Cacnb1Q8R3Z5 V1rg10-201ENSMUST00000183378 937 ntBASIC19.53■□□□□ 0.72
Cacnb1Q8R3Z5 Gm21147-201ENSMUST00000186046 913 ntBASIC19.53■□□□□ 0.72
Cacnb1Q8R3Z5 Gm9931-201ENSMUST00000193584 1185 ntBASIC19.53■□□□□ 0.72
Cacnb1Q8R3Z5 Olfr181-203ENSMUST00000205742 1104 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Cacnb1Q8R3Z5 Gm18025-201ENSMUST00000221733 862 ntBASIC19.53■□□□□ 0.72
Cacnb1Q8R3Z5 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cacnb1Q8R3Z5 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cacnb1Q8R3Z5 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cacnb1Q8R3Z5 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cacnb1Q8R3Z5 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC19.53■□□□□ 0.72
Cacnb1Q8R3Z5 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cacnb1Q8R3Z5 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cacnb1Q8R3Z5 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Cacnb1Q8R3Z5 Gm44742-201ENSMUST00000207190 1412 ntBASIC19.52■□□□□ 0.72
Cacnb1Q8R3Z5 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC19.52■□□□□ 0.72
Cacnb1Q8R3Z5 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cacnb1Q8R3Z5 Gm11008-201ENSMUST00000109032 622 ntTSL 5 BASIC19.52■□□□□ 0.72
Cacnb1Q8R3Z5 Gm26692-201ENSMUST00000180428 688 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Cacnb1Q8R3Z5 Gm28941-201ENSMUST00000185536 1017 ntBASIC19.52■□□□□ 0.72
Cacnb1Q8R3Z5 Smr2-202ENSMUST00000196070 813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cacnb1Q8R3Z5 Gm35216-201ENSMUST00000203777 433 ntTSL 2 BASIC19.52■□□□□ 0.72
Cacnb1Q8R3Z5 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC19.52■□□□□ 0.72
Cacnb1Q8R3Z5 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Cacnb1Q8R3Z5 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
Cacnb1Q8R3Z5 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC19.52■□□□□ 0.72
Cacnb1Q8R3Z5 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Cacnb1Q8R3Z5 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cacnb1Q8R3Z5 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC19.52■□□□□ 0.72
Cacnb1Q8R3Z5 AC122335.2-201ENSMUST00000213901 6181 ntBASIC19.52■□□□□ 0.72
Cacnb1Q8R3Z5 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cacnb1Q8R3Z5 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Cacnb1Q8R3Z5 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
Cacnb1Q8R3Z5 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Cacnb1Q8R3Z5 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC19.52■□□□□ 0.71
Cacnb1Q8R3Z5 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Cacnb1Q8R3Z5 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
Cacnb1Q8R3Z5 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cacnb1Q8R3Z5 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cacnb1Q8R3Z5 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cacnb1Q8R3Z5 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cacnb1Q8R3Z5 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cacnb1Q8R3Z5 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cacnb1Q8R3Z5 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cacnb1Q8R3Z5 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cacnb1Q8R3Z5 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cacnb1Q8R3Z5 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Cacnb1Q8R3Z5 Gm13401-201ENSMUST00000117074 291 ntBASIC19.51■□□□□ 0.71
Cacnb1Q8R3Z5 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cacnb1Q8R3Z5 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cacnb1Q8R3Z5 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC19.51■□□□□ 0.71
Cacnb1Q8R3Z5 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cacnb1Q8R3Z5 Peak1os-201ENSMUST00000181444 1264 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cacnb1Q8R3Z5 Mir6349-201ENSMUST00000184059 97 ntBASIC19.51■□□□□ 0.71
Cacnb1Q8R3Z5 Gm28766-201ENSMUST00000191086 234 ntBASIC19.51■□□□□ 0.71
Cacnb1Q8R3Z5 Trdn-202ENSMUST00000217779 1182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cacnb1Q8R3Z5 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cacnb1Q8R3Z5 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cacnb1Q8R3Z5 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cacnb1Q8R3Z5 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cacnb1Q8R3Z5 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cacnb1Q8R3Z5 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cacnb1Q8R3Z5 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cacnb1Q8R3Z5 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cacnb1Q8R3Z5 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC19.5■□□□□ 0.71
Cacnb1Q8R3Z5 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cacnb1Q8R3Z5 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cacnb1Q8R3Z5 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Cacnb1Q8R3Z5 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cacnb1Q8R3Z5 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cacnb1Q8R3Z5 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC19.5■□□□□ 0.71
Cacnb1Q8R3Z5 Gm14542-201ENSMUST00000118460 1248 ntBASIC19.5■□□□□ 0.71
Cacnb1Q8R3Z5 4933416E03Rik-201ENSMUST00000133091 1126 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms