Protein–RNA interactions for Protein: Q8R2T8

Gtf3c5, General transcription factor 3C polypeptide 5, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c5Q8R2T8 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC20.37■□□□□ 0.85
Gtf3c5Q8R2T8 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
Gtf3c5Q8R2T8 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Gtf3c5Q8R2T8 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Gtf3c5Q8R2T8 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gtf3c5Q8R2T8 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Gtf3c5Q8R2T8 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gtf3c5Q8R2T8 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gtf3c5Q8R2T8 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gtf3c5Q8R2T8 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gtf3c5Q8R2T8 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gtf3c5Q8R2T8 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gtf3c5Q8R2T8 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
Gtf3c5Q8R2T8 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Gtf3c5Q8R2T8 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gtf3c5Q8R2T8 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC20.36■□□□□ 0.85
Gtf3c5Q8R2T8 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Gtf3c5Q8R2T8 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gtf3c5Q8R2T8 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gtf3c5Q8R2T8 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gtf3c5Q8R2T8 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Gtf3c5Q8R2T8 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gtf3c5Q8R2T8 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gtf3c5Q8R2T8 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Gtf3c5Q8R2T8 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gtf3c5Q8R2T8 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gtf3c5Q8R2T8 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Gtf3c5Q8R2T8 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Gtf3c5Q8R2T8 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Gtf3c5Q8R2T8 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Gtf3c5Q8R2T8 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC20.35■□□□□ 0.85
Gtf3c5Q8R2T8 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC20.35■□□□□ 0.85
Gtf3c5Q8R2T8 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Gtf3c5Q8R2T8 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Gtf3c5Q8R2T8 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Gtf3c5Q8R2T8 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC20.35■□□□□ 0.85
Gtf3c5Q8R2T8 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Gtf3c5Q8R2T8 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Gtf3c5Q8R2T8 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Gtf3c5Q8R2T8 Rubie-203ENSMUST00000227803 2430 ntBASIC20.35■□□□□ 0.85
Gtf3c5Q8R2T8 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Gtf3c5Q8R2T8 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Gtf3c5Q8R2T8 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC20.34■□□□□ 0.85
Gtf3c5Q8R2T8 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC20.34■□□□□ 0.85
Gtf3c5Q8R2T8 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gtf3c5Q8R2T8 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gtf3c5Q8R2T8 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gtf3c5Q8R2T8 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Gtf3c5Q8R2T8 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gtf3c5Q8R2T8 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gtf3c5Q8R2T8 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Gtf3c5Q8R2T8 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Gtf3c5Q8R2T8 Odf3b-204ENSMUST00000227834 930 ntBASIC20.34■□□□□ 0.85
Gtf3c5Q8R2T8 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gtf3c5Q8R2T8 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Gtf3c5Q8R2T8 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Gtf3c5Q8R2T8 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Gtf3c5Q8R2T8 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Gtf3c5Q8R2T8 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Gtf3c5Q8R2T8 Gm4974-201ENSMUST00000209974 875 ntBASIC20.33■□□□□ 0.85
Gtf3c5Q8R2T8 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC20.33■□□□□ 0.85
Gtf3c5Q8R2T8 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Gtf3c5Q8R2T8 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Gtf3c5Q8R2T8 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Gtf3c5Q8R2T8 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC20.32■□□□□ 0.84
Gtf3c5Q8R2T8 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gtf3c5Q8R2T8 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gtf3c5Q8R2T8 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gtf3c5Q8R2T8 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Gtf3c5Q8R2T8 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Gtf3c5Q8R2T8 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Gtf3c5Q8R2T8 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Gtf3c5Q8R2T8 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Gtf3c5Q8R2T8 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gtf3c5Q8R2T8 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
Gtf3c5Q8R2T8 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gtf3c5Q8R2T8 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gtf3c5Q8R2T8 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Gtf3c5Q8R2T8 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gtf3c5Q8R2T8 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gtf3c5Q8R2T8 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gtf3c5Q8R2T8 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gtf3c5Q8R2T8 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gtf3c5Q8R2T8 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gtf3c5Q8R2T8 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Gtf3c5Q8R2T8 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC20.31■□□□□ 0.84
Gtf3c5Q8R2T8 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gtf3c5Q8R2T8 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gtf3c5Q8R2T8 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gtf3c5Q8R2T8 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Gtf3c5Q8R2T8 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gtf3c5Q8R2T8 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gtf3c5Q8R2T8 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gtf3c5Q8R2T8 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gtf3c5Q8R2T8 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC20.31■□□□□ 0.84
Gtf3c5Q8R2T8 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gtf3c5Q8R2T8 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Gtf3c5Q8R2T8 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gtf3c5Q8R2T8 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC20.3■□□□□ 0.84
Gtf3c5Q8R2T8 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms