Protein–RNA interactions for Protein: Q8K4E0

Alms1, Alstrom syndrome protein 1 homolog, mousemouse

Predictions only

Length 3,251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alms1Q8K4E0 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Alms1Q8K4E0 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.01■□□□□ 0.31
Alms1Q8K4E0 AC164629.2-201ENSMUST00000217916 270 ntBASIC17.01■□□□□ 0.31
Alms1Q8K4E0 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Alms1Q8K4E0 Spr-ps1-201ENSMUST00000089584 605 ntBASIC17.01■□□□□ 0.31
Alms1Q8K4E0 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Alms1Q8K4E0 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Alms1Q8K4E0 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Alms1Q8K4E0 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Alms1Q8K4E0 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC17.01■□□□□ 0.31
Alms1Q8K4E0 Gm27357-201ENSMUST00000183754 135 ntBASIC17.01■□□□□ 0.31
Alms1Q8K4E0 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Alms1Q8K4E0 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Alms1Q8K4E0 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Alms1Q8K4E0 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Alms1Q8K4E0 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Alms1Q8K4E0 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Alms1Q8K4E0 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Alms1Q8K4E0 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Alms1Q8K4E0 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Alms1Q8K4E0 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
Alms1Q8K4E0 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC17.01■□□□□ 0.31
Alms1Q8K4E0 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.01■□□□□ 0.31
Alms1Q8K4E0 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC17.01■□□□□ 0.31
Alms1Q8K4E0 Gm17808-201ENSMUST00000200859 894 ntBASIC17.01■□□□□ 0.31
Alms1Q8K4E0 Gm6443-201ENSMUST00000203599 874 ntBASIC17.01■□□□□ 0.31
Alms1Q8K4E0 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Alms1Q8K4E0 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Alms1Q8K4E0 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17■□□□□ 0.31
Alms1Q8K4E0 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17■□□□□ 0.31
Alms1Q8K4E0 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Alms1Q8K4E0 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Alms1Q8K4E0 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Alms1Q8K4E0 Gm15794-201ENSMUST00000120182 631 ntBASIC17■□□□□ 0.31
Alms1Q8K4E0 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Alms1Q8K4E0 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Alms1Q8K4E0 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17■□□□□ 0.31
Alms1Q8K4E0 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Alms1Q8K4E0 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Alms1Q8K4E0 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Alms1Q8K4E0 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17■□□□□ 0.31
Alms1Q8K4E0 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Alms1Q8K4E0 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Alms1Q8K4E0 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Alms1Q8K4E0 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Alms1Q8K4E0 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Alms1Q8K4E0 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC16.99■□□□□ 0.31
Alms1Q8K4E0 Gm13474-201ENSMUST00000122466 815 ntBASIC16.99■□□□□ 0.31
Alms1Q8K4E0 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC16.99■□□□□ 0.31
Alms1Q8K4E0 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Alms1Q8K4E0 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Alms1Q8K4E0 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Alms1Q8K4E0 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Alms1Q8K4E0 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Alms1Q8K4E0 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Alms1Q8K4E0 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Alms1Q8K4E0 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Alms1Q8K4E0 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
Alms1Q8K4E0 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Alms1Q8K4E0 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Alms1Q8K4E0 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Alms1Q8K4E0 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Alms1Q8K4E0 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.99■□□□□ 0.31
Alms1Q8K4E0 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC16.99■□□□□ 0.31
Alms1Q8K4E0 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Alms1Q8K4E0 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Alms1Q8K4E0 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Alms1Q8K4E0 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Alms1Q8K4E0 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Alms1Q8K4E0 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Alms1Q8K4E0 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Alms1Q8K4E0 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Alms1Q8K4E0 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Alms1Q8K4E0 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Alms1Q8K4E0 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Alms1Q8K4E0 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Alms1Q8K4E0 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Alms1Q8K4E0 Gm11860-201ENSMUST00000122346 1010 ntBASIC16.98■□□□□ 0.31
Alms1Q8K4E0 Gm18958-201ENSMUST00000174258 762 ntBASIC16.98■□□□□ 0.31
Alms1Q8K4E0 Gm27742-201ENSMUST00000184667 60 ntBASIC16.98■□□□□ 0.31
Alms1Q8K4E0 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Alms1Q8K4E0 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Alms1Q8K4E0 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Alms1Q8K4E0 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Alms1Q8K4E0 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Alms1Q8K4E0 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Alms1Q8K4E0 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Alms1Q8K4E0 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Alms1Q8K4E0 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Alms1Q8K4E0 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Alms1Q8K4E0 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Alms1Q8K4E0 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.97■□□□□ 0.31
Alms1Q8K4E0 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
Alms1Q8K4E0 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Alms1Q8K4E0 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Alms1Q8K4E0 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Alms1Q8K4E0 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Alms1Q8K4E0 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Alms1Q8K4E0 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC16.97■□□□□ 0.31
Alms1Q8K4E0 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms