Protein–RNA interactions for Protein: Q8CGC6

Rbm28, RNA-binding protein 28, mousemouse

Known RBP Predictions only

Length 750 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm28Q8CGC6 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Rbm28Q8CGC6 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rbm28Q8CGC6 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Rbm28Q8CGC6 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC20.6■□□□□ 0.89
Rbm28Q8CGC6 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rbm28Q8CGC6 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rbm28Q8CGC6 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Rbm28Q8CGC6 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
Rbm28Q8CGC6 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rbm28Q8CGC6 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC20.59■□□□□ 0.89
Rbm28Q8CGC6 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC20.59■□□□□ 0.89
Rbm28Q8CGC6 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rbm28Q8CGC6 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rbm28Q8CGC6 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rbm28Q8CGC6 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rbm28Q8CGC6 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rbm28Q8CGC6 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Rbm28Q8CGC6 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rbm28Q8CGC6 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC20.59■□□□□ 0.89
Rbm28Q8CGC6 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rbm28Q8CGC6 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC20.59■□□□□ 0.89
Rbm28Q8CGC6 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC20.59■□□□□ 0.89
Rbm28Q8CGC6 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC20.59■□□□□ 0.89
Rbm28Q8CGC6 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Rbm28Q8CGC6 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rbm28Q8CGC6 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rbm28Q8CGC6 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Rbm28Q8CGC6 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
Rbm28Q8CGC6 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rbm28Q8CGC6 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Rbm28Q8CGC6 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rbm28Q8CGC6 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rbm28Q8CGC6 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
Rbm28Q8CGC6 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rbm28Q8CGC6 Gm9694-201ENSMUST00000193347 1189 ntBASIC20.58■□□□□ 0.89
Rbm28Q8CGC6 Gm4974-201ENSMUST00000209974 875 ntBASIC20.58■□□□□ 0.89
Rbm28Q8CGC6 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rbm28Q8CGC6 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Rbm28Q8CGC6 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Rbm28Q8CGC6 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Rbm28Q8CGC6 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rbm28Q8CGC6 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Rbm28Q8CGC6 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rbm28Q8CGC6 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Rbm28Q8CGC6 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Rbm28Q8CGC6 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC20.57■□□□□ 0.88
Rbm28Q8CGC6 Gm10418-201ENSMUST00000100943 576 ntBASIC20.57■□□□□ 0.88
Rbm28Q8CGC6 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rbm28Q8CGC6 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rbm28Q8CGC6 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rbm28Q8CGC6 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC20.57■□□□□ 0.88
Rbm28Q8CGC6 Gm27463-201ENSMUST00000183569 57 ntBASIC20.57■□□□□ 0.88
Rbm28Q8CGC6 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC20.57■□□□□ 0.88
Rbm28Q8CGC6 Gm38027-201ENSMUST00000192315 235 ntBASIC20.57■□□□□ 0.88
Rbm28Q8CGC6 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC20.57■□□□□ 0.88
Rbm28Q8CGC6 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
Rbm28Q8CGC6 AC159205.6-201ENSMUST00000224935 887 ntBASIC20.57■□□□□ 0.88
Rbm28Q8CGC6 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Rbm28Q8CGC6 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rbm28Q8CGC6 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rbm28Q8CGC6 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rbm28Q8CGC6 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC20.57■□□□□ 0.88
Rbm28Q8CGC6 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rbm28Q8CGC6 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rbm28Q8CGC6 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
Rbm28Q8CGC6 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rbm28Q8CGC6 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rbm28Q8CGC6 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rbm28Q8CGC6 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rbm28Q8CGC6 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC20.56■□□□□ 0.88
Rbm28Q8CGC6 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC20.56■□□□□ 0.88
Rbm28Q8CGC6 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC20.56■□□□□ 0.88
Rbm28Q8CGC6 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Rbm28Q8CGC6 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rbm28Q8CGC6 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC20.56■□□□□ 0.88
Rbm28Q8CGC6 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rbm28Q8CGC6 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Rbm28Q8CGC6 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Rbm28Q8CGC6 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Rbm28Q8CGC6 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rbm28Q8CGC6 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rbm28Q8CGC6 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Rbm28Q8CGC6 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rbm28Q8CGC6 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC20.55■□□□□ 0.88
Rbm28Q8CGC6 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC20.55■□□□□ 0.88
Rbm28Q8CGC6 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rbm28Q8CGC6 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rbm28Q8CGC6 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rbm28Q8CGC6 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rbm28Q8CGC6 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rbm28Q8CGC6 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rbm28Q8CGC6 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Rbm28Q8CGC6 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rbm28Q8CGC6 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rbm28Q8CGC6 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rbm28Q8CGC6 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Rbm28Q8CGC6 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC20.54■□□□□ 0.88
Rbm28Q8CGC6 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC20.54■□□□□ 0.88
Rbm28Q8CGC6 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC20.54■□□□□ 0.88
Rbm28Q8CGC6 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms