Protein–RNA interactions for Protein: Q8CFI7

Polr2b, DNA-directed RNA polymerase II subunit RPB2, mousemouse

Known RBP Predictions only

Length 1,174 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2bQ8CFI7 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Polr2bQ8CFI7 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Polr2bQ8CFI7 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Polr2bQ8CFI7 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Polr2bQ8CFI7 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Polr2bQ8CFI7 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Polr2bQ8CFI7 Gm12085-201ENSMUST00000119263 940 ntBASIC18.72■□□□□ 0.59
Polr2bQ8CFI7 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.72■□□□□ 0.59
Polr2bQ8CFI7 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Polr2bQ8CFI7 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC18.72■□□□□ 0.59
Polr2bQ8CFI7 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Polr2bQ8CFI7 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Polr2bQ8CFI7 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Polr2bQ8CFI7 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Polr2bQ8CFI7 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Polr2bQ8CFI7 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Polr2bQ8CFI7 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Polr2bQ8CFI7 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Polr2bQ8CFI7 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Polr2bQ8CFI7 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Polr2bQ8CFI7 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Polr2bQ8CFI7 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Polr2bQ8CFI7 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Polr2bQ8CFI7 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Polr2bQ8CFI7 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
Polr2bQ8CFI7 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Polr2bQ8CFI7 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
Polr2bQ8CFI7 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Polr2bQ8CFI7 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC18.71■□□□□ 0.59
Polr2bQ8CFI7 Gm20472-201ENSMUST00000174403 1240 ntBASIC18.71■□□□□ 0.59
Polr2bQ8CFI7 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Polr2bQ8CFI7 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC18.71■□□□□ 0.59
Polr2bQ8CFI7 Gm21814-202ENSMUST00000203277 873 ntBASIC18.71■□□□□ 0.59
Polr2bQ8CFI7 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC18.71■□□□□ 0.59
Polr2bQ8CFI7 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Polr2bQ8CFI7 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Polr2bQ8CFI7 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Polr2bQ8CFI7 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Polr2bQ8CFI7 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Polr2bQ8CFI7 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Polr2bQ8CFI7 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Polr2bQ8CFI7 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Polr2bQ8CFI7 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Polr2bQ8CFI7 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Polr2bQ8CFI7 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Polr2bQ8CFI7 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Polr2bQ8CFI7 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Polr2bQ8CFI7 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC18.7■□□□□ 0.58
Polr2bQ8CFI7 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Polr2bQ8CFI7 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Polr2bQ8CFI7 Odf3b-204ENSMUST00000227834 930 ntBASIC18.7■□□□□ 0.58
Polr2bQ8CFI7 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Polr2bQ8CFI7 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Polr2bQ8CFI7 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Polr2bQ8CFI7 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Polr2bQ8CFI7 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Polr2bQ8CFI7 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Polr2bQ8CFI7 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Polr2bQ8CFI7 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Polr2bQ8CFI7 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Polr2bQ8CFI7 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Polr2bQ8CFI7 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Polr2bQ8CFI7 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Polr2bQ8CFI7 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Polr2bQ8CFI7 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Polr2bQ8CFI7 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Polr2bQ8CFI7 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Polr2bQ8CFI7 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.69■□□□□ 0.58
Polr2bQ8CFI7 Rarb-207ENSMUST00000225921 2756 ntBASIC18.69■□□□□ 0.58
Polr2bQ8CFI7 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Polr2bQ8CFI7 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Polr2bQ8CFI7 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Polr2bQ8CFI7 Gm3375-201ENSMUST00000203929 796 ntBASIC18.69■□□□□ 0.58
Polr2bQ8CFI7 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Polr2bQ8CFI7 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Polr2bQ8CFI7 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Polr2bQ8CFI7 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Polr2bQ8CFI7 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Polr2bQ8CFI7 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Polr2bQ8CFI7 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Polr2bQ8CFI7 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Polr2bQ8CFI7 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Polr2bQ8CFI7 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Polr2bQ8CFI7 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Polr2bQ8CFI7 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Polr2bQ8CFI7 Gm8969-201ENSMUST00000199694 526 ntBASIC18.68■□□□□ 0.58
Polr2bQ8CFI7 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC18.68■□□□□ 0.58
Polr2bQ8CFI7 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Polr2bQ8CFI7 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Polr2bQ8CFI7 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC18.68■□□□□ 0.58
Polr2bQ8CFI7 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Polr2bQ8CFI7 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Polr2bQ8CFI7 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Polr2bQ8CFI7 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Polr2bQ8CFI7 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.67■□□□□ 0.58
Polr2bQ8CFI7 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Polr2bQ8CFI7 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Polr2bQ8CFI7 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.67■□□□□ 0.58
Polr2bQ8CFI7 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Polr2bQ8CFI7 Gm15565-201ENSMUST00000118890 427 ntBASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms