Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC18.41■□□□□ 0.54
Ccdc28aQ8CEI3 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.41■□□□□ 0.54
Ccdc28aQ8CEI3 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc28aQ8CEI3 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc28aQ8CEI3 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc28aQ8CEI3 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Ccdc28aQ8CEI3 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc28aQ8CEI3 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc28aQ8CEI3 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
Ccdc28aQ8CEI3 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Ccdc28aQ8CEI3 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Ccdc28aQ8CEI3 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc28aQ8CEI3 Gm2399-201ENSMUST00000104944 225 ntBASIC18.4■□□□□ 0.54
Ccdc28aQ8CEI3 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Ccdc28aQ8CEI3 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc28aQ8CEI3 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC18.4■□□□□ 0.54
Ccdc28aQ8CEI3 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC18.4■□□□□ 0.54
Ccdc28aQ8CEI3 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.4■□□□□ 0.54
Ccdc28aQ8CEI3 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc28aQ8CEI3 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc28aQ8CEI3 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc28aQ8CEI3 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc28aQ8CEI3 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc28aQ8CEI3 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc28aQ8CEI3 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Ccdc28aQ8CEI3 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc28aQ8CEI3 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Ccdc28aQ8CEI3 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc28aQ8CEI3 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc28aQ8CEI3 AC125311.2-201ENSMUST00000227477 1940 ntBASIC18.39■□□□□ 0.53
Ccdc28aQ8CEI3 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc28aQ8CEI3 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc28aQ8CEI3 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc28aQ8CEI3 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Ccdc28aQ8CEI3 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc28aQ8CEI3 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc28aQ8CEI3 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc28aQ8CEI3 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc28aQ8CEI3 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc28aQ8CEI3 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc28aQ8CEI3 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc28aQ8CEI3 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.38■□□□□ 0.53
Ccdc28aQ8CEI3 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc28aQ8CEI3 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc28aQ8CEI3 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC18.38■□□□□ 0.53
Ccdc28aQ8CEI3 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc28aQ8CEI3 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC18.38■□□□□ 0.53
Ccdc28aQ8CEI3 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc28aQ8CEI3 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc28aQ8CEI3 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc28aQ8CEI3 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc28aQ8CEI3 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.38■□□□□ 0.53
Ccdc28aQ8CEI3 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Ccdc28aQ8CEI3 Gm42642-201ENSMUST00000200683 355 ntBASIC18.38■□□□□ 0.53
Ccdc28aQ8CEI3 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc28aQ8CEI3 Gm6365-201ENSMUST00000054711 744 ntBASIC18.38■□□□□ 0.53
Ccdc28aQ8CEI3 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc28aQ8CEI3 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Ccdc28aQ8CEI3 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc28aQ8CEI3 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc28aQ8CEI3 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc28aQ8CEI3 Gm43272-201ENSMUST00000200599 1584 ntBASIC18.38■□□□□ 0.53
Ccdc28aQ8CEI3 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc28aQ8CEI3 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc28aQ8CEI3 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC18.37■□□□□ 0.53
Ccdc28aQ8CEI3 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Ccdc28aQ8CEI3 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc28aQ8CEI3 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc28aQ8CEI3 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc28aQ8CEI3 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc28aQ8CEI3 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc28aQ8CEI3 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc28aQ8CEI3 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.37■□□□□ 0.53
Ccdc28aQ8CEI3 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc28aQ8CEI3 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc28aQ8CEI3 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc28aQ8CEI3 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc28aQ8CEI3 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc28aQ8CEI3 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc28aQ8CEI3 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc28aQ8CEI3 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Ccdc28aQ8CEI3 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Ccdc28aQ8CEI3 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.36■□□□□ 0.53
Ccdc28aQ8CEI3 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc28aQ8CEI3 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc28aQ8CEI3 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc28aQ8CEI3 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc28aQ8CEI3 Gm16401-202ENSMUST00000197463 2074 ntBASIC18.36■□□□□ 0.53
Ccdc28aQ8CEI3 Gm7291-201ENSMUST00000199147 382 ntBASIC18.36■□□□□ 0.53
Ccdc28aQ8CEI3 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.36■□□□□ 0.53
Ccdc28aQ8CEI3 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc28aQ8CEI3 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc28aQ8CEI3 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc28aQ8CEI3 Zfp783-201ENSMUST00000095946 670 ntBASIC18.36■□□□□ 0.53
Ccdc28aQ8CEI3 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Ccdc28aQ8CEI3 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc28aQ8CEI3 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc28aQ8CEI3 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc28aQ8CEI3 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc28aQ8CEI3 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms