Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb7Q8CDY9 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb7Q8CDY9 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb7Q8CDY9 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb7Q8CDY9 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb7Q8CDY9 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb7Q8CDY9 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Pcdhb7Q8CDY9 Gm12441-201ENSMUST00000121806 588 ntBASIC17.5■□□□□ 0.39
Pcdhb7Q8CDY9 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.5■□□□□ 0.39
Pcdhb7Q8CDY9 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.5■□□□□ 0.39
Pcdhb7Q8CDY9 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb7Q8CDY9 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb7Q8CDY9 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb7Q8CDY9 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb7Q8CDY9 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb7Q8CDY9 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb7Q8CDY9 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb7Q8CDY9 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb7Q8CDY9 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.49■□□□□ 0.39
Pcdhb7Q8CDY9 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb7Q8CDY9 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb7Q8CDY9 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Pcdhb7Q8CDY9 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC17.49■□□□□ 0.39
Pcdhb7Q8CDY9 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb7Q8CDY9 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Pcdhb7Q8CDY9 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb7Q8CDY9 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb7Q8CDY9 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb7Q8CDY9 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb7Q8CDY9 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb7Q8CDY9 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb7Q8CDY9 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb7Q8CDY9 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb7Q8CDY9 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb7Q8CDY9 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Pcdhb7Q8CDY9 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Pcdhb7Q8CDY9 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb7Q8CDY9 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb7Q8CDY9 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb7Q8CDY9 Dio3-201ENSMUST00000097228 1449 ntBASIC17.48■□□□□ 0.39
Pcdhb7Q8CDY9 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb7Q8CDY9 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb7Q8CDY9 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb7Q8CDY9 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb7Q8CDY9 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb7Q8CDY9 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.48■□□□□ 0.39
Pcdhb7Q8CDY9 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.48■□□□□ 0.39
Pcdhb7Q8CDY9 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb7Q8CDY9 Gm8969-201ENSMUST00000199694 526 ntBASIC17.48■□□□□ 0.39
Pcdhb7Q8CDY9 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
Pcdhb7Q8CDY9 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb7Q8CDY9 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb7Q8CDY9 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Pcdhb7Q8CDY9 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb7Q8CDY9 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb7Q8CDY9 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb7Q8CDY9 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.47■□□□□ 0.39
Pcdhb7Q8CDY9 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb7Q8CDY9 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb7Q8CDY9 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb7Q8CDY9 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb7Q8CDY9 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.47■□□□□ 0.39
Pcdhb7Q8CDY9 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.47■□□□□ 0.39
Pcdhb7Q8CDY9 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.47■□□□□ 0.39
Pcdhb7Q8CDY9 Mtag2-201ENSMUST00000058665 714 ntBASIC17.47■□□□□ 0.39
Pcdhb7Q8CDY9 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb7Q8CDY9 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb7Q8CDY9 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb7Q8CDY9 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb7Q8CDY9 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb7Q8CDY9 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.47■□□□□ 0.39
Pcdhb7Q8CDY9 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.47■□□□□ 0.39
Pcdhb7Q8CDY9 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Pcdhb7Q8CDY9 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb7Q8CDY9 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhb7Q8CDY9 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhb7Q8CDY9 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhb7Q8CDY9 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhb7Q8CDY9 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhb7Q8CDY9 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhb7Q8CDY9 Gm29257-201ENSMUST00000186115 639 ntBASIC17.46■□□□□ 0.39
Pcdhb7Q8CDY9 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhb7Q8CDY9 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.46■□□□□ 0.39
Pcdhb7Q8CDY9 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhb7Q8CDY9 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhb7Q8CDY9 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Pcdhb7Q8CDY9 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhb7Q8CDY9 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhb7Q8CDY9 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhb7Q8CDY9 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Pcdhb7Q8CDY9 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhb7Q8CDY9 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhb7Q8CDY9 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Pcdhb7Q8CDY9 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Pcdhb7Q8CDY9 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Pcdhb7Q8CDY9 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb7Q8CDY9 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb7Q8CDY9 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb7Q8CDY9 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb7Q8CDY9 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms