Protein–RNA interactions for Protein: Q8CDW1

Fam228a, Protein FAM228A, mousemouse

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam228aQ8CDW1 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Fam228aQ8CDW1 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Fam228aQ8CDW1 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Fam228aQ8CDW1 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Fam228aQ8CDW1 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Fam228aQ8CDW1 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Fam228aQ8CDW1 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Fam228aQ8CDW1 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Fam228aQ8CDW1 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Fam228aQ8CDW1 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Fam228aQ8CDW1 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Fam228aQ8CDW1 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Fam228aQ8CDW1 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Fam228aQ8CDW1 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Fam228aQ8CDW1 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Fam228aQ8CDW1 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.32■□□□□ 0.52
Fam228aQ8CDW1 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Fam228aQ8CDW1 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
Fam228aQ8CDW1 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Fam228aQ8CDW1 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Fam228aQ8CDW1 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Fam228aQ8CDW1 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Fam228aQ8CDW1 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC18.31■□□□□ 0.52
Fam228aQ8CDW1 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Fam228aQ8CDW1 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Fam228aQ8CDW1 Gm45774-201ENSMUST00000211992 2665 ntBASIC18.31■□□□□ 0.52
Fam228aQ8CDW1 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC18.31■□□□□ 0.52
Fam228aQ8CDW1 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.31■□□□□ 0.52
Fam228aQ8CDW1 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Fam228aQ8CDW1 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Fam228aQ8CDW1 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Fam228aQ8CDW1 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.31■□□□□ 0.52
Fam228aQ8CDW1 Mir8112-201ENSMUST00000184382 131 ntBASIC18.31■□□□□ 0.52
Fam228aQ8CDW1 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Fam228aQ8CDW1 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Fam228aQ8CDW1 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Fam228aQ8CDW1 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Fam228aQ8CDW1 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
Fam228aQ8CDW1 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Fam228aQ8CDW1 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Fam228aQ8CDW1 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Fam228aQ8CDW1 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Fam228aQ8CDW1 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Fam228aQ8CDW1 AC125311.2-201ENSMUST00000227477 1940 ntBASIC18.3■□□□□ 0.52
Fam228aQ8CDW1 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.3■□□□□ 0.52
Fam228aQ8CDW1 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.3■□□□□ 0.52
Fam228aQ8CDW1 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.3■□□□□ 0.52
Fam228aQ8CDW1 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Fam228aQ8CDW1 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Fam228aQ8CDW1 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Fam228aQ8CDW1 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Fam228aQ8CDW1 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Fam228aQ8CDW1 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Fam228aQ8CDW1 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Fam228aQ8CDW1 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Fam228aQ8CDW1 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Fam228aQ8CDW1 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Fam228aQ8CDW1 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Fam228aQ8CDW1 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Fam228aQ8CDW1 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Fam228aQ8CDW1 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Fam228aQ8CDW1 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.29■□□□□ 0.52
Fam228aQ8CDW1 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Fam228aQ8CDW1 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Fam228aQ8CDW1 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Fam228aQ8CDW1 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Fam228aQ8CDW1 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Fam228aQ8CDW1 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Fam228aQ8CDW1 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Fam228aQ8CDW1 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
Fam228aQ8CDW1 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Fam228aQ8CDW1 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Fam228aQ8CDW1 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Fam228aQ8CDW1 Gm38285-201ENSMUST00000192928 922 ntBASIC18.28■□□□□ 0.52
Fam228aQ8CDW1 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Fam228aQ8CDW1 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Fam228aQ8CDW1 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Fam228aQ8CDW1 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Fam228aQ8CDW1 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Fam228aQ8CDW1 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Fam228aQ8CDW1 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Fam228aQ8CDW1 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC18.28■□□□□ 0.52
Fam228aQ8CDW1 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Fam228aQ8CDW1 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Fam228aQ8CDW1 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Fam228aQ8CDW1 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Fam228aQ8CDW1 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Fam228aQ8CDW1 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Fam228aQ8CDW1 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Fam228aQ8CDW1 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Fam228aQ8CDW1 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Fam228aQ8CDW1 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.27■□□□□ 0.52
Fam228aQ8CDW1 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Fam228aQ8CDW1 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Fam228aQ8CDW1 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.27■□□□□ 0.52
Fam228aQ8CDW1 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Fam228aQ8CDW1 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Fam228aQ8CDW1 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.27■□□□□ 0.52
Fam228aQ8CDW1 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Fam228aQ8CDW1 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms