Protein–RNA interactions for Protein: Q8CDV0

Ccdc178, Coiled-coil domain-containing protein 178, mousemouse

Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc178Q8CDV0 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc178Q8CDV0 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC20.67■□□□□ 0.9
Ccdc178Q8CDV0 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
Ccdc178Q8CDV0 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC20.67■□□□□ 0.9
Ccdc178Q8CDV0 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc178Q8CDV0 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc178Q8CDV0 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc178Q8CDV0 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC20.67■□□□□ 0.9
Ccdc178Q8CDV0 Gm43294-201ENSMUST00000202850 2490 ntBASIC20.67■□□□□ 0.9
Ccdc178Q8CDV0 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc178Q8CDV0 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc178Q8CDV0 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc178Q8CDV0 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc178Q8CDV0 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC20.66■□□□□ 0.9
Ccdc178Q8CDV0 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc178Q8CDV0 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc178Q8CDV0 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc178Q8CDV0 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc178Q8CDV0 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc178Q8CDV0 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Ccdc178Q8CDV0 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc178Q8CDV0 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Ccdc178Q8CDV0 Mir6349-201ENSMUST00000184059 97 ntBASIC20.66■□□□□ 0.9
Ccdc178Q8CDV0 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Ccdc178Q8CDV0 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc178Q8CDV0 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc178Q8CDV0 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc178Q8CDV0 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc178Q8CDV0 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc178Q8CDV0 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc178Q8CDV0 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc178Q8CDV0 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc178Q8CDV0 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc178Q8CDV0 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc178Q8CDV0 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc178Q8CDV0 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc178Q8CDV0 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Ccdc178Q8CDV0 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc178Q8CDV0 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc178Q8CDV0 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc178Q8CDV0 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc178Q8CDV0 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ccdc178Q8CDV0 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ccdc178Q8CDV0 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Ccdc178Q8CDV0 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC20.64■□□□□ 0.9
Ccdc178Q8CDV0 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Ccdc178Q8CDV0 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC20.64■□□□□ 0.89
Ccdc178Q8CDV0 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ccdc178Q8CDV0 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ccdc178Q8CDV0 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ccdc178Q8CDV0 AC124581.1-201ENSMUST00000225416 1399 ntBASIC20.64■□□□□ 0.89
Ccdc178Q8CDV0 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC20.64■□□□□ 0.89
Ccdc178Q8CDV0 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Ccdc178Q8CDV0 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ccdc178Q8CDV0 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ccdc178Q8CDV0 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ccdc178Q8CDV0 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc178Q8CDV0 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc178Q8CDV0 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc178Q8CDV0 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc178Q8CDV0 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc178Q8CDV0 Gm12382-201ENSMUST00000122005 922 ntBASIC20.63■□□□□ 0.89
Ccdc178Q8CDV0 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC20.63■□□□□ 0.89
Ccdc178Q8CDV0 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC20.63■□□□□ 0.89
Ccdc178Q8CDV0 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC20.63■□□□□ 0.89
Ccdc178Q8CDV0 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Ccdc178Q8CDV0 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc178Q8CDV0 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc178Q8CDV0 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc178Q8CDV0 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc178Q8CDV0 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc178Q8CDV0 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc178Q8CDV0 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC20.62■□□□□ 0.89
Ccdc178Q8CDV0 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc178Q8CDV0 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc178Q8CDV0 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Ccdc178Q8CDV0 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc178Q8CDV0 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC20.62■□□□□ 0.89
Ccdc178Q8CDV0 Gm37292-201ENSMUST00000192062 758 ntBASIC20.62■□□□□ 0.89
Ccdc178Q8CDV0 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc178Q8CDV0 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc178Q8CDV0 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc178Q8CDV0 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc178Q8CDV0 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc178Q8CDV0 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc178Q8CDV0 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
Ccdc178Q8CDV0 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Ccdc178Q8CDV0 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc178Q8CDV0 Gm37055-201ENSMUST00000191866 133 ntBASIC20.61■□□□□ 0.89
Ccdc178Q8CDV0 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC20.61■□□□□ 0.89
Ccdc178Q8CDV0 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc178Q8CDV0 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc178Q8CDV0 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc178Q8CDV0 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Ccdc178Q8CDV0 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
Ccdc178Q8CDV0 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC20.61■□□□□ 0.89
Ccdc178Q8CDV0 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc178Q8CDV0 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc178Q8CDV0 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc178Q8CDV0 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms