Protein–RNA interactions for Protein: Q8CDR2

Rsph6a, Radial spoke head protein 6 homolog A, mousemouse

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph6aQ8CDR2 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC22.74■■□□□ 1.23
Rsph6aQ8CDR2 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Rsph6aQ8CDR2 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
Rsph6aQ8CDR2 Gm7213-201ENSMUST00000215977 950 ntBASIC22.74■■□□□ 1.23
Rsph6aQ8CDR2 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC22.74■■□□□ 1.23
Rsph6aQ8CDR2 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
Rsph6aQ8CDR2 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Rsph6aQ8CDR2 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC22.74■■□□□ 1.23
Rsph6aQ8CDR2 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
Rsph6aQ8CDR2 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC22.74■■□□□ 1.23
Rsph6aQ8CDR2 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC22.73■■□□□ 1.23
Rsph6aQ8CDR2 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Rsph6aQ8CDR2 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Rsph6aQ8CDR2 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Rsph6aQ8CDR2 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC22.73■■□□□ 1.23
Rsph6aQ8CDR2 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC22.73■■□□□ 1.23
Rsph6aQ8CDR2 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
Rsph6aQ8CDR2 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
Rsph6aQ8CDR2 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Rsph6aQ8CDR2 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Rsph6aQ8CDR2 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Rsph6aQ8CDR2 Gm5112-201ENSMUST00000204407 2368 ntBASIC22.72■■□□□ 1.23
Rsph6aQ8CDR2 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Rsph6aQ8CDR2 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC22.72■■□□□ 1.23
Rsph6aQ8CDR2 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC22.72■■□□□ 1.23
Rsph6aQ8CDR2 Gm21362-201ENSMUST00000194272 928 ntBASIC22.72■■□□□ 1.23
Rsph6aQ8CDR2 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Rsph6aQ8CDR2 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Rsph6aQ8CDR2 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC22.72■■□□□ 1.23
Rsph6aQ8CDR2 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Rsph6aQ8CDR2 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Rsph6aQ8CDR2 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC22.72■■□□□ 1.23
Rsph6aQ8CDR2 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Rsph6aQ8CDR2 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC22.72■■□□□ 1.23
Rsph6aQ8CDR2 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
Rsph6aQ8CDR2 Gm3272-201ENSMUST00000181181 1229 ntBASIC22.71■■□□□ 1.23
Rsph6aQ8CDR2 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC22.71■■□□□ 1.23
Rsph6aQ8CDR2 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Rsph6aQ8CDR2 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Rsph6aQ8CDR2 Gm10566-201ENSMUST00000086739 996 ntBASIC22.71■■□□□ 1.23
Rsph6aQ8CDR2 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC22.71■■□□□ 1.23
Rsph6aQ8CDR2 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
Rsph6aQ8CDR2 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Rsph6aQ8CDR2 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Rsph6aQ8CDR2 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Rsph6aQ8CDR2 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Rsph6aQ8CDR2 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC22.7■■□□□ 1.22
Rsph6aQ8CDR2 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
Rsph6aQ8CDR2 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC22.7■■□□□ 1.22
Rsph6aQ8CDR2 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Rsph6aQ8CDR2 Gm10819-201ENSMUST00000099988 561 ntBASIC22.7■■□□□ 1.22
Rsph6aQ8CDR2 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Rsph6aQ8CDR2 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Rsph6aQ8CDR2 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Rsph6aQ8CDR2 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Rsph6aQ8CDR2 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
Rsph6aQ8CDR2 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Rsph6aQ8CDR2 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC22.69■■□□□ 1.22
Rsph6aQ8CDR2 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC22.69■■□□□ 1.22
Rsph6aQ8CDR2 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC22.69■■□□□ 1.22
Rsph6aQ8CDR2 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC22.69■■□□□ 1.22
Rsph6aQ8CDR2 Gm10459-201ENSMUST00000202708 1155 ntBASIC22.69■■□□□ 1.22
Rsph6aQ8CDR2 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC22.69■■□□□ 1.22
Rsph6aQ8CDR2 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Rsph6aQ8CDR2 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
Rsph6aQ8CDR2 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Rsph6aQ8CDR2 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC22.69■■□□□ 1.22
Rsph6aQ8CDR2 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
Rsph6aQ8CDR2 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
Rsph6aQ8CDR2 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
Rsph6aQ8CDR2 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
Rsph6aQ8CDR2 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC22.68■■□□□ 1.22
Rsph6aQ8CDR2 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Rsph6aQ8CDR2 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Rsph6aQ8CDR2 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC22.68■■□□□ 1.22
Rsph6aQ8CDR2 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Rsph6aQ8CDR2 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Rsph6aQ8CDR2 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Rsph6aQ8CDR2 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Rsph6aQ8CDR2 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Rsph6aQ8CDR2 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Rsph6aQ8CDR2 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC22.67■■□□□ 1.22
Rsph6aQ8CDR2 Gm8258-201ENSMUST00000055593 1449 ntBASIC22.67■■□□□ 1.22
Rsph6aQ8CDR2 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Rsph6aQ8CDR2 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
Rsph6aQ8CDR2 AC125311.2-201ENSMUST00000227477 1940 ntBASIC22.67■■□□□ 1.22
Rsph6aQ8CDR2 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Rsph6aQ8CDR2 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC22.67■■□□□ 1.22
Rsph6aQ8CDR2 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Rsph6aQ8CDR2 Gm33142-201ENSMUST00000193913 867 ntBASIC22.67■■□□□ 1.22
Rsph6aQ8CDR2 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Rsph6aQ8CDR2 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Rsph6aQ8CDR2 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
Rsph6aQ8CDR2 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Rsph6aQ8CDR2 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Rsph6aQ8CDR2 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Rsph6aQ8CDR2 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Rsph6aQ8CDR2 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC22.66■■□□□ 1.22
Rsph6aQ8CDR2 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC22.66■■□□□ 1.22
Rsph6aQ8CDR2 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms