Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vcpip1Q8CDG3 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Vcpip1Q8CDG3 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Vcpip1Q8CDG3 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Vcpip1Q8CDG3 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Vcpip1Q8CDG3 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Vcpip1Q8CDG3 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vcpip1Q8CDG3 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.72■□□□□ 0.59
Vcpip1Q8CDG3 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.72■□□□□ 0.59
Vcpip1Q8CDG3 Gm5408-201ENSMUST00000197998 747 ntBASIC18.72■□□□□ 0.59
Vcpip1Q8CDG3 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Vcpip1Q8CDG3 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC18.72■□□□□ 0.59
Vcpip1Q8CDG3 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Vcpip1Q8CDG3 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vcpip1Q8CDG3 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Vcpip1Q8CDG3 Gm43859-201ENSMUST00000200075 1412 ntBASIC18.72■□□□□ 0.59
Vcpip1Q8CDG3 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Vcpip1Q8CDG3 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vcpip1Q8CDG3 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Vcpip1Q8CDG3 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vcpip1Q8CDG3 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Vcpip1Q8CDG3 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vcpip1Q8CDG3 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Vcpip1Q8CDG3 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.71■□□□□ 0.59
Vcpip1Q8CDG3 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vcpip1Q8CDG3 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Vcpip1Q8CDG3 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vcpip1Q8CDG3 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Vcpip1Q8CDG3 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC18.71■□□□□ 0.59
Vcpip1Q8CDG3 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Vcpip1Q8CDG3 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vcpip1Q8CDG3 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.71■□□□□ 0.59
Vcpip1Q8CDG3 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vcpip1Q8CDG3 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Vcpip1Q8CDG3 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Vcpip1Q8CDG3 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vcpip1Q8CDG3 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vcpip1Q8CDG3 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vcpip1Q8CDG3 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vcpip1Q8CDG3 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Vcpip1Q8CDG3 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC18.71■□□□□ 0.59
Vcpip1Q8CDG3 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vcpip1Q8CDG3 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vcpip1Q8CDG3 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vcpip1Q8CDG3 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Vcpip1Q8CDG3 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Vcpip1Q8CDG3 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Vcpip1Q8CDG3 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Vcpip1Q8CDG3 Gm10418-201ENSMUST00000100943 576 ntBASIC18.7■□□□□ 0.58
Vcpip1Q8CDG3 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Vcpip1Q8CDG3 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Vcpip1Q8CDG3 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.7■□□□□ 0.58
Vcpip1Q8CDG3 Mir8112-201ENSMUST00000184382 131 ntBASIC18.7■□□□□ 0.58
Vcpip1Q8CDG3 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC18.7■□□□□ 0.58
Vcpip1Q8CDG3 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vcpip1Q8CDG3 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.7■□□□□ 0.58
Vcpip1Q8CDG3 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vcpip1Q8CDG3 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vcpip1Q8CDG3 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vcpip1Q8CDG3 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vcpip1Q8CDG3 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
Vcpip1Q8CDG3 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vcpip1Q8CDG3 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Vcpip1Q8CDG3 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vcpip1Q8CDG3 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vcpip1Q8CDG3 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Vcpip1Q8CDG3 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vcpip1Q8CDG3 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC18.69■□□□□ 0.58
Vcpip1Q8CDG3 Mir2861-201ENSMUST00000175539 82 ntBASIC18.69■□□□□ 0.58
Vcpip1Q8CDG3 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Vcpip1Q8CDG3 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vcpip1Q8CDG3 Gm29791-202ENSMUST00000207888 369 ntBASIC18.69■□□□□ 0.58
Vcpip1Q8CDG3 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Vcpip1Q8CDG3 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vcpip1Q8CDG3 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vcpip1Q8CDG3 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vcpip1Q8CDG3 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vcpip1Q8CDG3 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vcpip1Q8CDG3 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Vcpip1Q8CDG3 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vcpip1Q8CDG3 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vcpip1Q8CDG3 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vcpip1Q8CDG3 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vcpip1Q8CDG3 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vcpip1Q8CDG3 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vcpip1Q8CDG3 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
Vcpip1Q8CDG3 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Vcpip1Q8CDG3 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Vcpip1Q8CDG3 Gm2559-201ENSMUST00000201323 363 ntBASIC18.68■□□□□ 0.58
Vcpip1Q8CDG3 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC18.68■□□□□ 0.58
Vcpip1Q8CDG3 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vcpip1Q8CDG3 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC18.68■□□□□ 0.58
Vcpip1Q8CDG3 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC18.68■□□□□ 0.58
Vcpip1Q8CDG3 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vcpip1Q8CDG3 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Vcpip1Q8CDG3 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vcpip1Q8CDG3 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
Vcpip1Q8CDG3 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vcpip1Q8CDG3 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vcpip1Q8CDG3 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms