Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col6a6Q8C6K9 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Col6a6Q8C6K9 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col6a6Q8C6K9 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC15.69■□□□□ 0.1
Col6a6Q8C6K9 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC15.69■□□□□ 0.1
Col6a6Q8C6K9 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col6a6Q8C6K9 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Col6a6Q8C6K9 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Col6a6Q8C6K9 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col6a6Q8C6K9 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC15.68■□□□□ 0.1
Col6a6Q8C6K9 Gm43514-201ENSMUST00000198852 424 ntBASIC15.68■□□□□ 0.1
Col6a6Q8C6K9 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col6a6Q8C6K9 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Col6a6Q8C6K9 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col6a6Q8C6K9 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col6a6Q8C6K9 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Col6a6Q8C6K9 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Col6a6Q8C6K9 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Col6a6Q8C6K9 Gm5864-201ENSMUST00000202263 970 ntBASIC15.68■□□□□ 0.1
Col6a6Q8C6K9 Gm45328-201ENSMUST00000210942 917 ntBASIC15.68■□□□□ 0.1
Col6a6Q8C6K9 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Col6a6Q8C6K9 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col6a6Q8C6K9 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col6a6Q8C6K9 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Col6a6Q8C6K9 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col6a6Q8C6K9 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col6a6Q8C6K9 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC15.67■□□□□ 0.1
Col6a6Q8C6K9 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Col6a6Q8C6K9 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC15.67■□□□□ 0.1
Col6a6Q8C6K9 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC15.67■□□□□ 0.1
Col6a6Q8C6K9 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Col6a6Q8C6K9 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col6a6Q8C6K9 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Col6a6Q8C6K9 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col6a6Q8C6K9 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Col6a6Q8C6K9 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Col6a6Q8C6K9 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Col6a6Q8C6K9 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col6a6Q8C6K9 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col6a6Q8C6K9 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col6a6Q8C6K9 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col6a6Q8C6K9 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Col6a6Q8C6K9 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Col6a6Q8C6K9 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC15.66■□□□□ 0.1
Col6a6Q8C6K9 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col6a6Q8C6K9 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col6a6Q8C6K9 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col6a6Q8C6K9 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col6a6Q8C6K9 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC15.66■□□□□ 0.1
Col6a6Q8C6K9 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Col6a6Q8C6K9 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col6a6Q8C6K9 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col6a6Q8C6K9 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Col6a6Q8C6K9 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC15.66■□□□□ 0.1
Col6a6Q8C6K9 Gm18733-201ENSMUST00000173950 856 ntBASIC15.66■□□□□ 0.1
Col6a6Q8C6K9 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC15.66■□□□□ 0.1
Col6a6Q8C6K9 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
Col6a6Q8C6K9 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col6a6Q8C6K9 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col6a6Q8C6K9 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC15.66■□□□□ 0.1
Col6a6Q8C6K9 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col6a6Q8C6K9 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Col6a6Q8C6K9 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
Col6a6Q8C6K9 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col6a6Q8C6K9 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col6a6Q8C6K9 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC15.65■□□□□ 0.1
Col6a6Q8C6K9 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Col6a6Q8C6K9 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Col6a6Q8C6K9 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col6a6Q8C6K9 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col6a6Q8C6K9 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col6a6Q8C6K9 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col6a6Q8C6K9 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col6a6Q8C6K9 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col6a6Q8C6K9 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Col6a6Q8C6K9 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col6a6Q8C6K9 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC15.65■□□□□ 0.1
Col6a6Q8C6K9 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Col6a6Q8C6K9 Gm27525-201ENSMUST00000184465 107 ntBASIC15.65■□□□□ 0.1
Col6a6Q8C6K9 AW822252-206ENSMUST00000208904 237 ntBASIC15.65■□□□□ 0.1
Col6a6Q8C6K9 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col6a6Q8C6K9 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col6a6Q8C6K9 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col6a6Q8C6K9 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Col6a6Q8C6K9 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col6a6Q8C6K9 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col6a6Q8C6K9 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col6a6Q8C6K9 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col6a6Q8C6K9 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col6a6Q8C6K9 Gm15794-201ENSMUST00000120182 631 ntBASIC15.64■□□□□ 0.09
Col6a6Q8C6K9 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Col6a6Q8C6K9 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Col6a6Q8C6K9 Gm6623-201ENSMUST00000173570 544 ntBASIC15.64■□□□□ 0.09
Col6a6Q8C6K9 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Col6a6Q8C6K9 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC15.64■□□□□ 0.09
Col6a6Q8C6K9 Gm43347-201ENSMUST00000200226 580 ntBASIC15.64■□□□□ 0.09
Col6a6Q8C6K9 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC15.64■□□□□ 0.09
Col6a6Q8C6K9 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC15.64■□□□□ 0.09
Col6a6Q8C6K9 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Col6a6Q8C6K9 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms