Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Usp44Q8C2S0 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Usp44Q8C2S0 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Usp44Q8C2S0 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Usp44Q8C2S0 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC20.39■□□□□ 0.86
Usp44Q8C2S0 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Usp44Q8C2S0 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC20.39■□□□□ 0.86
Usp44Q8C2S0 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Usp44Q8C2S0 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
Usp44Q8C2S0 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Usp44Q8C2S0 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Usp44Q8C2S0 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Usp44Q8C2S0 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Usp44Q8C2S0 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Usp44Q8C2S0 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC20.39■□□□□ 0.85
Usp44Q8C2S0 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Usp44Q8C2S0 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC20.39■□□□□ 0.85
Usp44Q8C2S0 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Usp44Q8C2S0 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Usp44Q8C2S0 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Usp44Q8C2S0 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Usp44Q8C2S0 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC20.39■□□□□ 0.85
Usp44Q8C2S0 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Usp44Q8C2S0 Gm5898-201ENSMUST00000121016 2071 ntBASIC20.38■□□□□ 0.85
Usp44Q8C2S0 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Usp44Q8C2S0 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Usp44Q8C2S0 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Usp44Q8C2S0 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC20.38■□□□□ 0.85
Usp44Q8C2S0 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Usp44Q8C2S0 Gm17661-201ENSMUST00000170317 270 ntBASIC20.38■□□□□ 0.85
Usp44Q8C2S0 Gm9484-201ENSMUST00000195892 1159 ntBASIC20.38■□□□□ 0.85
Usp44Q8C2S0 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Usp44Q8C2S0 Arhgef4-208ENSMUST00000211073 171 ntBASIC20.38■□□□□ 0.85
Usp44Q8C2S0 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Usp44Q8C2S0 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Usp44Q8C2S0 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Usp44Q8C2S0 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Usp44Q8C2S0 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Usp44Q8C2S0 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Usp44Q8C2S0 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Usp44Q8C2S0 Gm7638-201ENSMUST00000121348 967 ntBASIC20.37■□□□□ 0.85
Usp44Q8C2S0 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC20.37■□□□□ 0.85
Usp44Q8C2S0 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Usp44Q8C2S0 Gm37025-201ENSMUST00000195159 829 ntBASIC20.37■□□□□ 0.85
Usp44Q8C2S0 Dapk1-207ENSMUST00000226059 5009 ntBASIC20.37■□□□□ 0.85
Usp44Q8C2S0 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Usp44Q8C2S0 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Usp44Q8C2S0 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Usp44Q8C2S0 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Usp44Q8C2S0 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Usp44Q8C2S0 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Usp44Q8C2S0 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Usp44Q8C2S0 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Usp44Q8C2S0 AL672049.1-201ENSMUST00000197943 91 ntBASIC20.36■□□□□ 0.85
Usp44Q8C2S0 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Usp44Q8C2S0 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Usp44Q8C2S0 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Usp44Q8C2S0 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Usp44Q8C2S0 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Usp44Q8C2S0 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Usp44Q8C2S0 Tfap2a-209ENSMUST00000225180 1828 ntBASIC20.36■□□□□ 0.85
Usp44Q8C2S0 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Usp44Q8C2S0 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Usp44Q8C2S0 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Usp44Q8C2S0 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Usp44Q8C2S0 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Usp44Q8C2S0 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC20.35■□□□□ 0.85
Usp44Q8C2S0 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Usp44Q8C2S0 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Usp44Q8C2S0 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Usp44Q8C2S0 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Usp44Q8C2S0 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC20.35■□□□□ 0.85
Usp44Q8C2S0 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Usp44Q8C2S0 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC20.35■□□□□ 0.85
Usp44Q8C2S0 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Usp44Q8C2S0 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Usp44Q8C2S0 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Usp44Q8C2S0 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Usp44Q8C2S0 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Usp44Q8C2S0 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Usp44Q8C2S0 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Usp44Q8C2S0 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Usp44Q8C2S0 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Usp44Q8C2S0 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Usp44Q8C2S0 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Usp44Q8C2S0 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Usp44Q8C2S0 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Usp44Q8C2S0 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Usp44Q8C2S0 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
Usp44Q8C2S0 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Usp44Q8C2S0 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Usp44Q8C2S0 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
Usp44Q8C2S0 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Usp44Q8C2S0 Gm16499-203ENSMUST00000204633 2177 ntBASIC20.34■□□□□ 0.85
Usp44Q8C2S0 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Usp44Q8C2S0 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Usp44Q8C2S0 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Usp44Q8C2S0 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Usp44Q8C2S0 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Usp44Q8C2S0 Gm43338-201ENSMUST00000198617 2223 ntBASIC20.34■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms