Protein–RNA interactions for Protein: Q8C166

Cpne1, Copine-1, mousemouse

Predictions only

Length 536 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne1Q8C166 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cpne1Q8C166 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Cpne1Q8C166 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cpne1Q8C166 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Cpne1Q8C166 Gm12382-201ENSMUST00000122005 922 ntBASIC16.28■□□□□ 0.2
Cpne1Q8C166 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cpne1Q8C166 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cpne1Q8C166 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cpne1Q8C166 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cpne1Q8C166 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cpne1Q8C166 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cpne1Q8C166 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cpne1Q8C166 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cpne1Q8C166 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cpne1Q8C166 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cpne1Q8C166 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cpne1Q8C166 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cpne1Q8C166 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Cpne1Q8C166 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Cpne1Q8C166 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cpne1Q8C166 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Cpne1Q8C166 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cpne1Q8C166 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cpne1Q8C166 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cpne1Q8C166 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cpne1Q8C166 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cpne1Q8C166 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cpne1Q8C166 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cpne1Q8C166 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.27■□□□□ 0.2
Cpne1Q8C166 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cpne1Q8C166 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cpne1Q8C166 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Cpne1Q8C166 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Cpne1Q8C166 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Cpne1Q8C166 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC16.26■□□□□ 0.19
Cpne1Q8C166 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cpne1Q8C166 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC16.26■□□□□ 0.19
Cpne1Q8C166 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cpne1Q8C166 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cpne1Q8C166 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
Cpne1Q8C166 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cpne1Q8C166 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC16.26■□□□□ 0.19
Cpne1Q8C166 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Cpne1Q8C166 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC16.26■□□□□ 0.19
Cpne1Q8C166 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cpne1Q8C166 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Cpne1Q8C166 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cpne1Q8C166 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cpne1Q8C166 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.26■□□□□ 0.19
Cpne1Q8C166 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cpne1Q8C166 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cpne1Q8C166 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cpne1Q8C166 CT010444.2-201ENSMUST00000217877 1629 ntBASIC16.26■□□□□ 0.19
Cpne1Q8C166 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cpne1Q8C166 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cpne1Q8C166 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cpne1Q8C166 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cpne1Q8C166 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cpne1Q8C166 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cpne1Q8C166 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cpne1Q8C166 AC124581.1-201ENSMUST00000225416 1399 ntBASIC16.26■□□□□ 0.19
Cpne1Q8C166 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cpne1Q8C166 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cpne1Q8C166 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cpne1Q8C166 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cpne1Q8C166 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC16.25■□□□□ 0.19
Cpne1Q8C166 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cpne1Q8C166 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cpne1Q8C166 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cpne1Q8C166 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC16.25■□□□□ 0.19
Cpne1Q8C166 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cpne1Q8C166 AC153881.1-201ENSMUST00000214448 284 ntBASIC16.25■□□□□ 0.19
Cpne1Q8C166 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC16.25■□□□□ 0.19
Cpne1Q8C166 AC154649.1-201ENSMUST00000227392 384 ntBASIC16.25■□□□□ 0.19
Cpne1Q8C166 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Cpne1Q8C166 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cpne1Q8C166 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cpne1Q8C166 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cpne1Q8C166 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cpne1Q8C166 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cpne1Q8C166 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.25■□□□□ 0.19
Cpne1Q8C166 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cpne1Q8C166 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cpne1Q8C166 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cpne1Q8C166 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cpne1Q8C166 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cpne1Q8C166 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cpne1Q8C166 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Cpne1Q8C166 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cpne1Q8C166 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cpne1Q8C166 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cpne1Q8C166 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cpne1Q8C166 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cpne1Q8C166 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cpne1Q8C166 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cpne1Q8C166 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC16.24■□□□□ 0.19
Cpne1Q8C166 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
Cpne1Q8C166 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cpne1Q8C166 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Cpne1Q8C166 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms