Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Sh3rf2Q8BZT2 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.67■□□□□ 0.42
Sh3rf2Q8BZT2 Il3ra-202ENSMUST00000223589 738 ntBASIC17.67■□□□□ 0.42
Sh3rf2Q8BZT2 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sh3rf2Q8BZT2 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sh3rf2Q8BZT2 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sh3rf2Q8BZT2 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Sh3rf2Q8BZT2 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sh3rf2Q8BZT2 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Sh3rf2Q8BZT2 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Sh3rf2Q8BZT2 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.66■□□□□ 0.42
Sh3rf2Q8BZT2 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sh3rf2Q8BZT2 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sh3rf2Q8BZT2 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Sh3rf2Q8BZT2 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sh3rf2Q8BZT2 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sh3rf2Q8BZT2 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.66■□□□□ 0.42
Sh3rf2Q8BZT2 Gm6728-201ENSMUST00000178117 1065 ntBASIC17.66■□□□□ 0.42
Sh3rf2Q8BZT2 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.66■□□□□ 0.42
Sh3rf2Q8BZT2 Gm7370-201ENSMUST00000219471 767 ntBASIC17.66■□□□□ 0.42
Sh3rf2Q8BZT2 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Sh3rf2Q8BZT2 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.66■□□□□ 0.42
Sh3rf2Q8BZT2 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Sh3rf2Q8BZT2 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sh3rf2Q8BZT2 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sh3rf2Q8BZT2 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.65■□□□□ 0.42
Sh3rf2Q8BZT2 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Sh3rf2Q8BZT2 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh3rf2Q8BZT2 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh3rf2Q8BZT2 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Sh3rf2Q8BZT2 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Sh3rf2Q8BZT2 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh3rf2Q8BZT2 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh3rf2Q8BZT2 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh3rf2Q8BZT2 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Sh3rf2Q8BZT2 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Sh3rf2Q8BZT2 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.65■□□□□ 0.42
Sh3rf2Q8BZT2 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh3rf2Q8BZT2 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh3rf2Q8BZT2 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh3rf2Q8BZT2 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
Sh3rf2Q8BZT2 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh3rf2Q8BZT2 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.65■□□□□ 0.42
Sh3rf2Q8BZT2 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Sh3rf2Q8BZT2 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Sh3rf2Q8BZT2 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sh3rf2Q8BZT2 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sh3rf2Q8BZT2 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Sh3rf2Q8BZT2 AA414768-201ENSMUST00000121924 1257 ntBASIC17.64■□□□□ 0.41
Sh3rf2Q8BZT2 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Sh3rf2Q8BZT2 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sh3rf2Q8BZT2 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.64■□□□□ 0.41
Sh3rf2Q8BZT2 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sh3rf2Q8BZT2 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sh3rf2Q8BZT2 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sh3rf2Q8BZT2 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.63■□□□□ 0.41
Sh3rf2Q8BZT2 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sh3rf2Q8BZT2 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sh3rf2Q8BZT2 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Sh3rf2Q8BZT2 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sh3rf2Q8BZT2 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sh3rf2Q8BZT2 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Sh3rf2Q8BZT2 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Sh3rf2Q8BZT2 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sh3rf2Q8BZT2 Gm21362-201ENSMUST00000194272 928 ntBASIC17.63■□□□□ 0.41
Sh3rf2Q8BZT2 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Sh3rf2Q8BZT2 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Sh3rf2Q8BZT2 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sh3rf2Q8BZT2 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Sh3rf2Q8BZT2 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sh3rf2Q8BZT2 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sh3rf2Q8BZT2 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Sh3rf2Q8BZT2 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Sh3rf2Q8BZT2 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sh3rf2Q8BZT2 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sh3rf2Q8BZT2 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Sh3rf2Q8BZT2 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Sh3rf2Q8BZT2 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC17.62■□□□□ 0.41
Sh3rf2Q8BZT2 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Sh3rf2Q8BZT2 Mir8112-201ENSMUST00000184382 131 ntBASIC17.62■□□□□ 0.41
Sh3rf2Q8BZT2 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sh3rf2Q8BZT2 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Sh3rf2Q8BZT2 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sh3rf2Q8BZT2 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Sh3rf2Q8BZT2 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sh3rf2Q8BZT2 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sh3rf2Q8BZT2 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sh3rf2Q8BZT2 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sh3rf2Q8BZT2 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
Sh3rf2Q8BZT2 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sh3rf2Q8BZT2 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.62■□□□□ 0.41
Sh3rf2Q8BZT2 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sh3rf2Q8BZT2 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.61■□□□□ 0.41
Sh3rf2Q8BZT2 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Sh3rf2Q8BZT2 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sh3rf2Q8BZT2 Gm17661-201ENSMUST00000170317 270 ntBASIC17.61■□□□□ 0.41
Sh3rf2Q8BZT2 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sh3rf2Q8BZT2 Gm7367-201ENSMUST00000057611 492 ntBASIC17.61■□□□□ 0.41
Sh3rf2Q8BZT2 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sh3rf2Q8BZT2 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms