Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Usp43Q8BUM9 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Usp43Q8BUM9 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Usp43Q8BUM9 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Usp43Q8BUM9 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp43Q8BUM9 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Usp43Q8BUM9 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Usp43Q8BUM9 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp43Q8BUM9 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.64■□□□□ 0.41
Usp43Q8BUM9 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp43Q8BUM9 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Usp43Q8BUM9 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Usp43Q8BUM9 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
Usp43Q8BUM9 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp43Q8BUM9 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Usp43Q8BUM9 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp43Q8BUM9 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp43Q8BUM9 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp43Q8BUM9 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Usp43Q8BUM9 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Usp43Q8BUM9 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp43Q8BUM9 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Usp43Q8BUM9 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp43Q8BUM9 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp43Q8BUM9 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp43Q8BUM9 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
Usp43Q8BUM9 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
Usp43Q8BUM9 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Usp43Q8BUM9 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Usp43Q8BUM9 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.62■□□□□ 0.41
Usp43Q8BUM9 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Usp43Q8BUM9 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp43Q8BUM9 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.62■□□□□ 0.41
Usp43Q8BUM9 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp43Q8BUM9 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp43Q8BUM9 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
Usp43Q8BUM9 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.62■□□□□ 0.41
Usp43Q8BUM9 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Usp43Q8BUM9 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp43Q8BUM9 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp43Q8BUM9 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp43Q8BUM9 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp43Q8BUM9 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp43Q8BUM9 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp43Q8BUM9 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp43Q8BUM9 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp43Q8BUM9 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.61■□□□□ 0.41
Usp43Q8BUM9 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Usp43Q8BUM9 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Usp43Q8BUM9 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Usp43Q8BUM9 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Usp43Q8BUM9 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp43Q8BUM9 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp43Q8BUM9 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Usp43Q8BUM9 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Usp43Q8BUM9 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.6■□□□□ 0.41
Usp43Q8BUM9 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Usp43Q8BUM9 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Usp43Q8BUM9 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Usp43Q8BUM9 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Usp43Q8BUM9 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Usp43Q8BUM9 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.6■□□□□ 0.41
Usp43Q8BUM9 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Usp43Q8BUM9 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Usp43Q8BUM9 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.6■□□□□ 0.41
Usp43Q8BUM9 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Usp43Q8BUM9 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Usp43Q8BUM9 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Usp43Q8BUM9 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Usp43Q8BUM9 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Usp43Q8BUM9 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.59■□□□□ 0.41
Usp43Q8BUM9 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Usp43Q8BUM9 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Usp43Q8BUM9 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Usp43Q8BUM9 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Usp43Q8BUM9 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Usp43Q8BUM9 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Usp43Q8BUM9 Gm24841-201ENSMUST00000158676 357 ntBASIC17.59■□□□□ 0.41
Usp43Q8BUM9 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Usp43Q8BUM9 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.59■□□□□ 0.41
Usp43Q8BUM9 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Usp43Q8BUM9 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Usp43Q8BUM9 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.59■□□□□ 0.41
Usp43Q8BUM9 AC175538.1-201ENSMUST00000225343 1269 ntBASIC17.59■□□□□ 0.41
Usp43Q8BUM9 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Usp43Q8BUM9 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Usp43Q8BUM9 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Usp43Q8BUM9 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Usp43Q8BUM9 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Usp43Q8BUM9 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Usp43Q8BUM9 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Usp43Q8BUM9 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Usp43Q8BUM9 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Usp43Q8BUM9 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.58■□□□□ 0.41
Usp43Q8BUM9 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Usp43Q8BUM9 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Usp43Q8BUM9 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Usp43Q8BUM9 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.58■□□□□ 0.4
Usp43Q8BUM9 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Usp43Q8BUM9 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms