Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cpne3Q8BT60 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.85■□□□□ 0.29
Cpne3Q8BT60 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cpne3Q8BT60 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cpne3Q8BT60 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cpne3Q8BT60 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cpne3Q8BT60 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cpne3Q8BT60 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cpne3Q8BT60 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cpne3Q8BT60 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cpne3Q8BT60 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Cpne3Q8BT60 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cpne3Q8BT60 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Cpne3Q8BT60 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cpne3Q8BT60 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Cpne3Q8BT60 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cpne3Q8BT60 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cpne3Q8BT60 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cpne3Q8BT60 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cpne3Q8BT60 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Cpne3Q8BT60 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.83■□□□□ 0.28
Cpne3Q8BT60 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cpne3Q8BT60 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cpne3Q8BT60 Gm37179-201ENSMUST00000194862 823 ntBASIC16.83■□□□□ 0.28
Cpne3Q8BT60 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Cpne3Q8BT60 Gm44672-201ENSMUST00000206944 1098 ntBASIC16.83■□□□□ 0.28
Cpne3Q8BT60 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Cpne3Q8BT60 AC108858.1-201ENSMUST00000228461 1498 ntBASIC16.83■□□□□ 0.28
Cpne3Q8BT60 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cpne3Q8BT60 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cpne3Q8BT60 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cpne3Q8BT60 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cpne3Q8BT60 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cpne3Q8BT60 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cpne3Q8BT60 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC16.82■□□□□ 0.28
Cpne3Q8BT60 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC16.82■□□□□ 0.28
Cpne3Q8BT60 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cpne3Q8BT60 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cpne3Q8BT60 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cpne3Q8BT60 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cpne3Q8BT60 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cpne3Q8BT60 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cpne3Q8BT60 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cpne3Q8BT60 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cpne3Q8BT60 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Cpne3Q8BT60 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cpne3Q8BT60 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cpne3Q8BT60 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cpne3Q8BT60 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Cpne3Q8BT60 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cpne3Q8BT60 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cpne3Q8BT60 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.81■□□□□ 0.28
Cpne3Q8BT60 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cpne3Q8BT60 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cpne3Q8BT60 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cpne3Q8BT60 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Cpne3Q8BT60 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cpne3Q8BT60 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC16.81■□□□□ 0.28
Cpne3Q8BT60 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cpne3Q8BT60 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cpne3Q8BT60 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cpne3Q8BT60 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cpne3Q8BT60 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cpne3Q8BT60 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.81■□□□□ 0.28
Cpne3Q8BT60 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cpne3Q8BT60 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cpne3Q8BT60 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cpne3Q8BT60 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cpne3Q8BT60 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
Cpne3Q8BT60 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC16.8■□□□□ 0.28
Cpne3Q8BT60 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cpne3Q8BT60 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cpne3Q8BT60 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cpne3Q8BT60 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cpne3Q8BT60 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cpne3Q8BT60 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Cpne3Q8BT60 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cpne3Q8BT60 Gm15847-201ENSMUST00000121417 1065 ntBASIC16.8■□□□□ 0.28
Cpne3Q8BT60 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cpne3Q8BT60 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Cpne3Q8BT60 Gm29791-202ENSMUST00000207888 369 ntBASIC16.8■□□□□ 0.28
Cpne3Q8BT60 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC16.8■□□□□ 0.28
Cpne3Q8BT60 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cpne3Q8BT60 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cpne3Q8BT60 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cpne3Q8BT60 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cpne3Q8BT60 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cpne3Q8BT60 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cpne3Q8BT60 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cpne3Q8BT60 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cpne3Q8BT60 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cpne3Q8BT60 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cpne3Q8BT60 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Cpne3Q8BT60 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cpne3Q8BT60 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Cpne3Q8BT60 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.79■□□□□ 0.28
Cpne3Q8BT60 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cpne3Q8BT60 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC16.79■□□□□ 0.28
Cpne3Q8BT60 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cpne3Q8BT60 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms