Protein–RNA interactions for Protein: Q8BQP8

Rab11fip4, Rab11 family-interacting protein 4, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip4Q8BQP8 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rab11fip4Q8BQP8 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rab11fip4Q8BQP8 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rab11fip4Q8BQP8 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rab11fip4Q8BQP8 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC19.28■□□□□ 0.68
Rab11fip4Q8BQP8 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Rab11fip4Q8BQP8 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rab11fip4Q8BQP8 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Rab11fip4Q8BQP8 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rab11fip4Q8BQP8 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rab11fip4Q8BQP8 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rab11fip4Q8BQP8 Gm9484-201ENSMUST00000195892 1159 ntBASIC19.27■□□□□ 0.68
Rab11fip4Q8BQP8 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rab11fip4Q8BQP8 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Rab11fip4Q8BQP8 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rab11fip4Q8BQP8 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC19.27■□□□□ 0.68
Rab11fip4Q8BQP8 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rab11fip4Q8BQP8 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC19.27■□□□□ 0.67
Rab11fip4Q8BQP8 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rab11fip4Q8BQP8 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Rab11fip4Q8BQP8 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
Rab11fip4Q8BQP8 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rab11fip4Q8BQP8 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rab11fip4Q8BQP8 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rab11fip4Q8BQP8 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rab11fip4Q8BQP8 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Rab11fip4Q8BQP8 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC19.26■□□□□ 0.67
Rab11fip4Q8BQP8 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rab11fip4Q8BQP8 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rab11fip4Q8BQP8 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rab11fip4Q8BQP8 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rab11fip4Q8BQP8 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rab11fip4Q8BQP8 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rab11fip4Q8BQP8 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rab11fip4Q8BQP8 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rab11fip4Q8BQP8 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rab11fip4Q8BQP8 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rab11fip4Q8BQP8 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
Rab11fip4Q8BQP8 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rab11fip4Q8BQP8 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rab11fip4Q8BQP8 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC19.25■□□□□ 0.67
Rab11fip4Q8BQP8 Gm15375-201ENSMUST00000119510 849 ntBASIC19.25■□□□□ 0.67
Rab11fip4Q8BQP8 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC19.25■□□□□ 0.67
Rab11fip4Q8BQP8 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rab11fip4Q8BQP8 Mir5122-201ENSMUST00000175004 89 ntBASIC19.25■□□□□ 0.67
Rab11fip4Q8BQP8 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rab11fip4Q8BQP8 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rab11fip4Q8BQP8 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rab11fip4Q8BQP8 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rab11fip4Q8BQP8 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rab11fip4Q8BQP8 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rab11fip4Q8BQP8 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rab11fip4Q8BQP8 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rab11fip4Q8BQP8 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Rab11fip4Q8BQP8 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
Rab11fip4Q8BQP8 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rab11fip4Q8BQP8 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC19.24■□□□□ 0.67
Rab11fip4Q8BQP8 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC19.24■□□□□ 0.67
Rab11fip4Q8BQP8 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Rab11fip4Q8BQP8 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rab11fip4Q8BQP8 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Rab11fip4Q8BQP8 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rab11fip4Q8BQP8 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rab11fip4Q8BQP8 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rab11fip4Q8BQP8 AC108858.1-201ENSMUST00000228461 1498 ntBASIC19.23■□□□□ 0.67
Rab11fip4Q8BQP8 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rab11fip4Q8BQP8 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rab11fip4Q8BQP8 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rab11fip4Q8BQP8 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rab11fip4Q8BQP8 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rab11fip4Q8BQP8 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC19.23■□□□□ 0.67
Rab11fip4Q8BQP8 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rab11fip4Q8BQP8 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rab11fip4Q8BQP8 Gm43183-201ENSMUST00000200632 547 ntBASIC19.23■□□□□ 0.67
Rab11fip4Q8BQP8 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC19.23■□□□□ 0.67
Rab11fip4Q8BQP8 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rab11fip4Q8BQP8 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rab11fip4Q8BQP8 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rab11fip4Q8BQP8 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rab11fip4Q8BQP8 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rab11fip4Q8BQP8 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Rab11fip4Q8BQP8 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rab11fip4Q8BQP8 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Rab11fip4Q8BQP8 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rab11fip4Q8BQP8 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rab11fip4Q8BQP8 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rab11fip4Q8BQP8 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC19.22■□□□□ 0.67
Rab11fip4Q8BQP8 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rab11fip4Q8BQP8 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Rab11fip4Q8BQP8 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rab11fip4Q8BQP8 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rab11fip4Q8BQP8 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC19.22■□□□□ 0.67
Rab11fip4Q8BQP8 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
Rab11fip4Q8BQP8 Gm29994-201ENSMUST00000195495 1193 ntBASIC19.22■□□□□ 0.67
Rab11fip4Q8BQP8 Gm5417-201ENSMUST00000079706 384 ntBASIC19.22■□□□□ 0.67
Rab11fip4Q8BQP8 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC19.22■□□□□ 0.67
Rab11fip4Q8BQP8 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rab11fip4Q8BQP8 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rab11fip4Q8BQP8 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rab11fip4Q8BQP8 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms