Protein–RNA interactions for Protein: Q8BNV1

Trmt2a, tRNA (uracil-5-)-methyltransferase homolog A, mousemouse

Known RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trmt2aQ8BNV1 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trmt2aQ8BNV1 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trmt2aQ8BNV1 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC20.18■□□□□ 0.82
Trmt2aQ8BNV1 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC20.18■□□□□ 0.82
Trmt2aQ8BNV1 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Trmt2aQ8BNV1 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trmt2aQ8BNV1 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Trmt2aQ8BNV1 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Trmt2aQ8BNV1 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trmt2aQ8BNV1 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trmt2aQ8BNV1 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trmt2aQ8BNV1 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trmt2aQ8BNV1 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Trmt2aQ8BNV1 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC20.18■□□□□ 0.82
Trmt2aQ8BNV1 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trmt2aQ8BNV1 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC20.17■□□□□ 0.82
Trmt2aQ8BNV1 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Trmt2aQ8BNV1 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trmt2aQ8BNV1 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trmt2aQ8BNV1 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trmt2aQ8BNV1 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
Trmt2aQ8BNV1 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Trmt2aQ8BNV1 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Trmt2aQ8BNV1 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trmt2aQ8BNV1 Actl10-202ENSMUST00000226583 1501 ntBASIC20.17■□□□□ 0.82
Trmt2aQ8BNV1 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trmt2aQ8BNV1 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trmt2aQ8BNV1 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trmt2aQ8BNV1 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trmt2aQ8BNV1 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trmt2aQ8BNV1 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Trmt2aQ8BNV1 Gm26039-201ENSMUST00000158152 144 ntBASIC20.16■□□□□ 0.82
Trmt2aQ8BNV1 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC20.16■□□□□ 0.82
Trmt2aQ8BNV1 Ank2-226ENSMUST00000189368 339 ntBASIC20.16■□□□□ 0.82
Trmt2aQ8BNV1 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
Trmt2aQ8BNV1 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Trmt2aQ8BNV1 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Trmt2aQ8BNV1 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trmt2aQ8BNV1 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trmt2aQ8BNV1 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Trmt2aQ8BNV1 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trmt2aQ8BNV1 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trmt2aQ8BNV1 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Trmt2aQ8BNV1 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC20.16■□□□□ 0.82
Trmt2aQ8BNV1 Gm29518-201ENSMUST00000190858 372 ntBASIC20.15■□□□□ 0.82
Trmt2aQ8BNV1 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC20.15■□□□□ 0.82
Trmt2aQ8BNV1 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Trmt2aQ8BNV1 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Trmt2aQ8BNV1 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trmt2aQ8BNV1 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
Trmt2aQ8BNV1 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trmt2aQ8BNV1 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Trmt2aQ8BNV1 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trmt2aQ8BNV1 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
Trmt2aQ8BNV1 Gm5828-201ENSMUST00000071842 1860 ntBASIC20.14■□□□□ 0.81
Trmt2aQ8BNV1 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trmt2aQ8BNV1 Gm11355-201ENSMUST00000121120 306 ntBASIC20.14■□□□□ 0.81
Trmt2aQ8BNV1 Gm7284-201ENSMUST00000131667 944 ntBASIC20.14■□□□□ 0.81
Trmt2aQ8BNV1 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Trmt2aQ8BNV1 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Trmt2aQ8BNV1 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trmt2aQ8BNV1 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Trmt2aQ8BNV1 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trmt2aQ8BNV1 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trmt2aQ8BNV1 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trmt2aQ8BNV1 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC20.14■□□□□ 0.81
Trmt2aQ8BNV1 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Trmt2aQ8BNV1 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trmt2aQ8BNV1 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trmt2aQ8BNV1 AC154855.1-201ENSMUST00000227353 1458 ntBASIC20.13■□□□□ 0.81
Trmt2aQ8BNV1 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trmt2aQ8BNV1 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trmt2aQ8BNV1 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trmt2aQ8BNV1 Gm14859-201ENSMUST00000117752 357 ntBASIC20.13■□□□□ 0.81
Trmt2aQ8BNV1 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Trmt2aQ8BNV1 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC20.13■□□□□ 0.81
Trmt2aQ8BNV1 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Trmt2aQ8BNV1 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trmt2aQ8BNV1 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trmt2aQ8BNV1 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trmt2aQ8BNV1 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trmt2aQ8BNV1 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trmt2aQ8BNV1 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Trmt2aQ8BNV1 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Trmt2aQ8BNV1 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trmt2aQ8BNV1 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trmt2aQ8BNV1 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trmt2aQ8BNV1 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Trmt2aQ8BNV1 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Trmt2aQ8BNV1 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trmt2aQ8BNV1 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trmt2aQ8BNV1 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trmt2aQ8BNV1 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Trmt2aQ8BNV1 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trmt2aQ8BNV1 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trmt2aQ8BNV1 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Trmt2aQ8BNV1 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trmt2aQ8BNV1 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC20.12■□□□□ 0.81
Trmt2aQ8BNV1 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trmt2aQ8BNV1 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms