Protein–RNA interactions for Protein: Q8BMK4

Ckap4, Cytoskeleton-associated protein 4, mousemouse

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4Q8BMK4 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ckap4Q8BMK4 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.51■□□□□ 0.23
Ckap4Q8BMK4 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ckap4Q8BMK4 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Ckap4Q8BMK4 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC16.51■□□□□ 0.23
Ckap4Q8BMK4 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ckap4Q8BMK4 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Ckap4Q8BMK4 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ckap4Q8BMK4 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ckap4Q8BMK4 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ckap4Q8BMK4 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ckap4Q8BMK4 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ckap4Q8BMK4 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ckap4Q8BMK4 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
Ckap4Q8BMK4 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ckap4Q8BMK4 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ckap4Q8BMK4 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ckap4Q8BMK4 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ckap4Q8BMK4 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Ckap4Q8BMK4 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Ckap4Q8BMK4 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ckap4Q8BMK4 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ckap4Q8BMK4 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Ckap4Q8BMK4 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ckap4Q8BMK4 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ckap4Q8BMK4 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ckap4Q8BMK4 Gm10602-201ENSMUST00000098239 609 ntBASIC16.5■□□□□ 0.23
Ckap4Q8BMK4 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ckap4Q8BMK4 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ckap4Q8BMK4 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ckap4Q8BMK4 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Ckap4Q8BMK4 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Ckap4Q8BMK4 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ckap4Q8BMK4 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ckap4Q8BMK4 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.5■□□□□ 0.23
Ckap4Q8BMK4 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ckap4Q8BMK4 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Ckap4Q8BMK4 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Ckap4Q8BMK4 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ckap4Q8BMK4 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ckap4Q8BMK4 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Ckap4Q8BMK4 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ckap4Q8BMK4 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ckap4Q8BMK4 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ckap4Q8BMK4 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Ckap4Q8BMK4 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Ckap4Q8BMK4 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Ckap4Q8BMK4 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ckap4Q8BMK4 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ckap4Q8BMK4 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ckap4Q8BMK4 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Ckap4Q8BMK4 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC16.49■□□□□ 0.23
Ckap4Q8BMK4 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ckap4Q8BMK4 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ckap4Q8BMK4 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC16.49■□□□□ 0.23
Ckap4Q8BMK4 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Ckap4Q8BMK4 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ckap4Q8BMK4 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ckap4Q8BMK4 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ckap4Q8BMK4 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ckap4Q8BMK4 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.49■□□□□ 0.23
Ckap4Q8BMK4 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ckap4Q8BMK4 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ckap4Q8BMK4 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ckap4Q8BMK4 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ckap4Q8BMK4 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ckap4Q8BMK4 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ckap4Q8BMK4 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ckap4Q8BMK4 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ckap4Q8BMK4 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ckap4Q8BMK4 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC16.48■□□□□ 0.23
Ckap4Q8BMK4 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC16.48■□□□□ 0.23
Ckap4Q8BMK4 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Ckap4Q8BMK4 Slc35b2-207ENSMUST00000226086 850 ntBASIC16.48■□□□□ 0.23
Ckap4Q8BMK4 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ckap4Q8BMK4 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Ckap4Q8BMK4 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Ckap4Q8BMK4 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
Ckap4Q8BMK4 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ckap4Q8BMK4 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ckap4Q8BMK4 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ckap4Q8BMK4 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ckap4Q8BMK4 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Ckap4Q8BMK4 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.47■□□□□ 0.23
Ckap4Q8BMK4 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ckap4Q8BMK4 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ckap4Q8BMK4 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ckap4Q8BMK4 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ckap4Q8BMK4 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ckap4Q8BMK4 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC16.47■□□□□ 0.23
Ckap4Q8BMK4 Gm3807-201ENSMUST00000193520 1168 ntBASIC16.47■□□□□ 0.23
Ckap4Q8BMK4 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ckap4Q8BMK4 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ckap4Q8BMK4 Haglr-201ENSMUST00000100000 2085 ntBASIC16.47■□□□□ 0.23
Ckap4Q8BMK4 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ckap4Q8BMK4 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ckap4Q8BMK4 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ckap4Q8BMK4 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.47■□□□□ 0.23
Ckap4Q8BMK4 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.47■□□□□ 0.23
Ckap4Q8BMK4 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms