Protein–RNA interactions for Protein: Q8BKA3

Srrm4, Serine/arginine repetitive matrix protein 4, mousemouse

Predictions only

Length 608 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm4Q8BKA3 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Srrm4Q8BKA3 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Srrm4Q8BKA3 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Srrm4Q8BKA3 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Srrm4Q8BKA3 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Srrm4Q8BKA3 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Srrm4Q8BKA3 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Srrm4Q8BKA3 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Srrm4Q8BKA3 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Srrm4Q8BKA3 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC15.1■□□□□ 0.01
Srrm4Q8BKA3 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Srrm4Q8BKA3 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC15.1■□□□□ 0.01
Srrm4Q8BKA3 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Srrm4Q8BKA3 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Srrm4Q8BKA3 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
Srrm4Q8BKA3 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Srrm4Q8BKA3 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Srrm4Q8BKA3 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Srrm4Q8BKA3 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Srrm4Q8BKA3 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Srrm4Q8BKA3 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Srrm4Q8BKA3 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Srrm4Q8BKA3 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Srrm4Q8BKA3 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Srrm4Q8BKA3 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Srrm4Q8BKA3 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Srrm4Q8BKA3 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC15.09■□□□□ 0.01
Srrm4Q8BKA3 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Srrm4Q8BKA3 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Srrm4Q8BKA3 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Srrm4Q8BKA3 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Srrm4Q8BKA3 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Srrm4Q8BKA3 Gm11643-201ENSMUST00000119578 864 ntBASIC15.09■□□□□ 0.01
Srrm4Q8BKA3 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Srrm4Q8BKA3 Gm6576-201ENSMUST00000169678 883 ntBASIC15.09■□□□□ 0.01
Srrm4Q8BKA3 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Srrm4Q8BKA3 Gm10252-201ENSMUST00000209541 832 ntBASIC15.09■□□□□ 0.01
Srrm4Q8BKA3 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Srrm4Q8BKA3 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Srrm4Q8BKA3 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
Srrm4Q8BKA3 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Srrm4Q8BKA3 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Srrm4Q8BKA3 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Srrm4Q8BKA3 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Srrm4Q8BKA3 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Srrm4Q8BKA3 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Srrm4Q8BKA3 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Srrm4Q8BKA3 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Srrm4Q8BKA3 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Srrm4Q8BKA3 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Srrm4Q8BKA3 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC15.08■□□□□ 0
Srrm4Q8BKA3 Gm12382-201ENSMUST00000122005 922 ntBASIC15.08■□□□□ 0
Srrm4Q8BKA3 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Srrm4Q8BKA3 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Srrm4Q8BKA3 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC15.08■□□□□ 0
Srrm4Q8BKA3 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC15.08■□□□□ 0
Srrm4Q8BKA3 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC15.08■□□□□ 0
Srrm4Q8BKA3 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Srrm4Q8BKA3 Gm37820-201ENSMUST00000194021 2147 ntBASIC15.08■□□□□ 0
Srrm4Q8BKA3 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Srrm4Q8BKA3 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Srrm4Q8BKA3 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Srrm4Q8BKA3 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Srrm4Q8BKA3 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Srrm4Q8BKA3 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Srrm4Q8BKA3 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Srrm4Q8BKA3 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Srrm4Q8BKA3 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Srrm4Q8BKA3 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC15.07■□□□□ 0
Srrm4Q8BKA3 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Srrm4Q8BKA3 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC15.07■□□□□ 0
Srrm4Q8BKA3 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Srrm4Q8BKA3 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC15.07■□□□□ 0
Srrm4Q8BKA3 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC15.07■□□□□ 0
Srrm4Q8BKA3 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC15.07■□□□□ 0
Srrm4Q8BKA3 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC15.07■□□□□ 0
Srrm4Q8BKA3 AC175538.1-201ENSMUST00000225343 1269 ntBASIC15.07■□□□□ 0
Srrm4Q8BKA3 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Srrm4Q8BKA3 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC15.07■□□□□ 0
Srrm4Q8BKA3 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Srrm4Q8BKA3 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Srrm4Q8BKA3 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC15.07■□□□□ 0
Srrm4Q8BKA3 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Srrm4Q8BKA3 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Srrm4Q8BKA3 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Srrm4Q8BKA3 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Srrm4Q8BKA3 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Srrm4Q8BKA3 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Srrm4Q8BKA3 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Srrm4Q8BKA3 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Srrm4Q8BKA3 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Srrm4Q8BKA3 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC15.06■□□□□ 0
Srrm4Q8BKA3 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC15.06■□□□□ 0
Srrm4Q8BKA3 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Srrm4Q8BKA3 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Srrm4Q8BKA3 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC15.06■□□□□ 0
Srrm4Q8BKA3 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC15.06■□□□□ 0
Srrm4Q8BKA3 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Srrm4Q8BKA3 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC15.06■□□□□ 0
Srrm4Q8BKA3 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms