Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.84■□□□□ 0.45
Chmp2bQ8BJF9 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.84■□□□□ 0.45
Chmp2bQ8BJF9 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chmp2bQ8BJF9 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Chmp2bQ8BJF9 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chmp2bQ8BJF9 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Chmp2bQ8BJF9 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Chmp2bQ8BJF9 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Chmp2bQ8BJF9 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Chmp2bQ8BJF9 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.83■□□□□ 0.45
Chmp2bQ8BJF9 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Chmp2bQ8BJF9 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.83■□□□□ 0.45
Chmp2bQ8BJF9 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Chmp2bQ8BJF9 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Chmp2bQ8BJF9 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Chmp2bQ8BJF9 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC17.83■□□□□ 0.44
Chmp2bQ8BJF9 Gm18284-201ENSMUST00000172604 624 ntBASIC17.83■□□□□ 0.44
Chmp2bQ8BJF9 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Chmp2bQ8BJF9 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Chmp2bQ8BJF9 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Chmp2bQ8BJF9 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Chmp2bQ8BJF9 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
Chmp2bQ8BJF9 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Chmp2bQ8BJF9 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Chmp2bQ8BJF9 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Chmp2bQ8BJF9 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Chmp2bQ8BJF9 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Chmp2bQ8BJF9 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Chmp2bQ8BJF9 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Chmp2bQ8BJF9 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Chmp2bQ8BJF9 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chmp2bQ8BJF9 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chmp2bQ8BJF9 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chmp2bQ8BJF9 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chmp2bQ8BJF9 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.82■□□□□ 0.44
Chmp2bQ8BJF9 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chmp2bQ8BJF9 AC154231.1-201ENSMUST00000220564 2175 ntBASIC17.82■□□□□ 0.44
Chmp2bQ8BJF9 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chmp2bQ8BJF9 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC17.82■□□□□ 0.44
Chmp2bQ8BJF9 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chmp2bQ8BJF9 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Chmp2bQ8BJF9 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.82■□□□□ 0.44
Chmp2bQ8BJF9 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chmp2bQ8BJF9 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Chmp2bQ8BJF9 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Chmp2bQ8BJF9 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.82■□□□□ 0.44
Chmp2bQ8BJF9 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chmp2bQ8BJF9 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.82■□□□□ 0.44
Chmp2bQ8BJF9 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chmp2bQ8BJF9 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chmp2bQ8BJF9 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.81■□□□□ 0.44
Chmp2bQ8BJF9 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Chmp2bQ8BJF9 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chmp2bQ8BJF9 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC17.81■□□□□ 0.44
Chmp2bQ8BJF9 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chmp2bQ8BJF9 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chmp2bQ8BJF9 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.81■□□□□ 0.44
Chmp2bQ8BJF9 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Chmp2bQ8BJF9 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chmp2bQ8BJF9 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.81■□□□□ 0.44
Chmp2bQ8BJF9 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chmp2bQ8BJF9 Gm44549-201ENSMUST00000208351 577 ntBASIC17.81■□□□□ 0.44
Chmp2bQ8BJF9 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.81■□□□□ 0.44
Chmp2bQ8BJF9 Zfp783-201ENSMUST00000095946 670 ntBASIC17.81■□□□□ 0.44
Chmp2bQ8BJF9 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Chmp2bQ8BJF9 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.81■□□□□ 0.44
Chmp2bQ8BJF9 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chmp2bQ8BJF9 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Chmp2bQ8BJF9 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chmp2bQ8BJF9 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chmp2bQ8BJF9 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chmp2bQ8BJF9 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chmp2bQ8BJF9 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Chmp2bQ8BJF9 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Chmp2bQ8BJF9 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chmp2bQ8BJF9 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Chmp2bQ8BJF9 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chmp2bQ8BJF9 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
Chmp2bQ8BJF9 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chmp2bQ8BJF9 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Chmp2bQ8BJF9 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chmp2bQ8BJF9 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chmp2bQ8BJF9 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chmp2bQ8BJF9 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Chmp2bQ8BJF9 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chmp2bQ8BJF9 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chmp2bQ8BJF9 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chmp2bQ8BJF9 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chmp2bQ8BJF9 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Chmp2bQ8BJF9 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.8■□□□□ 0.44
Chmp2bQ8BJF9 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chmp2bQ8BJF9 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chmp2bQ8BJF9 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chmp2bQ8BJF9 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chmp2bQ8BJF9 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chmp2bQ8BJF9 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chmp2bQ8BJF9 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chmp2bQ8BJF9 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chmp2bQ8BJF9 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Chmp2bQ8BJF9 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms