Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Pcdh20Q8BIZ0 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdh20Q8BIZ0 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Pcdh20Q8BIZ0 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdh20Q8BIZ0 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdh20Q8BIZ0 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdh20Q8BIZ0 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdh20Q8BIZ0 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdh20Q8BIZ0 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdh20Q8BIZ0 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17■□□□□ 0.31
Pcdh20Q8BIZ0 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17■□□□□ 0.31
Pcdh20Q8BIZ0 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Pcdh20Q8BIZ0 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Pcdh20Q8BIZ0 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17■□□□□ 0.31
Pcdh20Q8BIZ0 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdh20Q8BIZ0 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdh20Q8BIZ0 Gm13168-201ENSMUST00000121771 632 ntBASIC17■□□□□ 0.31
Pcdh20Q8BIZ0 Gm27275-201ENSMUST00000184318 272 ntBASIC17■□□□□ 0.31
Pcdh20Q8BIZ0 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17■□□□□ 0.31
Pcdh20Q8BIZ0 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17■□□□□ 0.31
Pcdh20Q8BIZ0 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdh20Q8BIZ0 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17■□□□□ 0.31
Pcdh20Q8BIZ0 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdh20Q8BIZ0 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17■□□□□ 0.31
Pcdh20Q8BIZ0 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17■□□□□ 0.31
Pcdh20Q8BIZ0 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdh20Q8BIZ0 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdh20Q8BIZ0 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdh20Q8BIZ0 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Pcdh20Q8BIZ0 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdh20Q8BIZ0 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC16.99■□□□□ 0.31
Pcdh20Q8BIZ0 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdh20Q8BIZ0 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Pcdh20Q8BIZ0 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdh20Q8BIZ0 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdh20Q8BIZ0 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC16.99■□□□□ 0.31
Pcdh20Q8BIZ0 Gm22240-201ENSMUST00000175225 82 ntBASIC16.99■□□□□ 0.31
Pcdh20Q8BIZ0 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdh20Q8BIZ0 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdh20Q8BIZ0 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdh20Q8BIZ0 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdh20Q8BIZ0 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdh20Q8BIZ0 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Pcdh20Q8BIZ0 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdh20Q8BIZ0 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdh20Q8BIZ0 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdh20Q8BIZ0 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdh20Q8BIZ0 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdh20Q8BIZ0 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdh20Q8BIZ0 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdh20Q8BIZ0 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdh20Q8BIZ0 Gm21596-201ENSMUST00000178049 1316 ntBASIC16.98■□□□□ 0.31
Pcdh20Q8BIZ0 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.98■□□□□ 0.31
Pcdh20Q8BIZ0 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Pcdh20Q8BIZ0 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC16.98■□□□□ 0.31
Pcdh20Q8BIZ0 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdh20Q8BIZ0 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdh20Q8BIZ0 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Pcdh20Q8BIZ0 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdh20Q8BIZ0 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdh20Q8BIZ0 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdh20Q8BIZ0 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdh20Q8BIZ0 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdh20Q8BIZ0 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdh20Q8BIZ0 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.98■□□□□ 0.31
Pcdh20Q8BIZ0 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdh20Q8BIZ0 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdh20Q8BIZ0 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdh20Q8BIZ0 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdh20Q8BIZ0 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdh20Q8BIZ0 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdh20Q8BIZ0 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdh20Q8BIZ0 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdh20Q8BIZ0 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdh20Q8BIZ0 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC16.97■□□□□ 0.31
Pcdh20Q8BIZ0 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC16.97■□□□□ 0.31
Pcdh20Q8BIZ0 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdh20Q8BIZ0 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdh20Q8BIZ0 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC16.97■□□□□ 0.31
Pcdh20Q8BIZ0 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdh20Q8BIZ0 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Pcdh20Q8BIZ0 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdh20Q8BIZ0 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdh20Q8BIZ0 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdh20Q8BIZ0 Flg-201ENSMUST00000050758 1488 ntBASIC16.97■□□□□ 0.31
Pcdh20Q8BIZ0 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdh20Q8BIZ0 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdh20Q8BIZ0 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Pcdh20Q8BIZ0 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdh20Q8BIZ0 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdh20Q8BIZ0 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC16.96■□□□□ 0.31
Pcdh20Q8BIZ0 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdh20Q8BIZ0 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdh20Q8BIZ0 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Pcdh20Q8BIZ0 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdh20Q8BIZ0 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdh20Q8BIZ0 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdh20Q8BIZ0 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC16.96■□□□□ 0.31
Pcdh20Q8BIZ0 Gm15847-201ENSMUST00000121417 1065 ntBASIC16.96■□□□□ 0.31
Pcdh20Q8BIZ0 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms