Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Gm5828-201ENSMUST00000071842 1860 ntBASIC16.34■□□□□ 0.21
Clrn3Q8BHH8 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clrn3Q8BHH8 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Clrn3Q8BHH8 Gm15375-201ENSMUST00000119510 849 ntBASIC16.34■□□□□ 0.21
Clrn3Q8BHH8 Mir2861-201ENSMUST00000175539 82 ntBASIC16.34■□□□□ 0.21
Clrn3Q8BHH8 Gm20760-201ENSMUST00000179197 648 ntBASIC16.34■□□□□ 0.21
Clrn3Q8BHH8 Alkbh1-212ENSMUST00000185301 408 ntBASIC16.34■□□□□ 0.21
Clrn3Q8BHH8 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Clrn3Q8BHH8 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clrn3Q8BHH8 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clrn3Q8BHH8 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Clrn3Q8BHH8 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clrn3Q8BHH8 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clrn3Q8BHH8 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clrn3Q8BHH8 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clrn3Q8BHH8 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clrn3Q8BHH8 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clrn3Q8BHH8 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Clrn3Q8BHH8 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Clrn3Q8BHH8 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Clrn3Q8BHH8 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.33■□□□□ 0.21
Clrn3Q8BHH8 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Clrn3Q8BHH8 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Clrn3Q8BHH8 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Clrn3Q8BHH8 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Clrn3Q8BHH8 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Clrn3Q8BHH8 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Clrn3Q8BHH8 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Clrn3Q8BHH8 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Clrn3Q8BHH8 Gm27275-201ENSMUST00000184318 272 ntBASIC16.33■□□□□ 0.2
Clrn3Q8BHH8 AC135637.1-201ENSMUST00000227750 365 ntBASIC16.33■□□□□ 0.2
Clrn3Q8BHH8 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Clrn3Q8BHH8 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
Clrn3Q8BHH8 Mtag2-201ENSMUST00000058665 714 ntBASIC16.33■□□□□ 0.2
Clrn3Q8BHH8 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Clrn3Q8BHH8 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Clrn3Q8BHH8 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Clrn3Q8BHH8 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Clrn3Q8BHH8 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Clrn3Q8BHH8 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Clrn3Q8BHH8 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Clrn3Q8BHH8 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Clrn3Q8BHH8 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Clrn3Q8BHH8 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Clrn3Q8BHH8 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Clrn3Q8BHH8 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Clrn3Q8BHH8 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Clrn3Q8BHH8 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Clrn3Q8BHH8 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Clrn3Q8BHH8 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clrn3Q8BHH8 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.32■□□□□ 0.2
Clrn3Q8BHH8 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clrn3Q8BHH8 Gm11643-201ENSMUST00000119578 864 ntBASIC16.32■□□□□ 0.2
Clrn3Q8BHH8 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Clrn3Q8BHH8 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC16.32■□□□□ 0.2
Clrn3Q8BHH8 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Clrn3Q8BHH8 Gm29241-201ENSMUST00000189260 1096 ntBASIC16.32■□□□□ 0.2
Clrn3Q8BHH8 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clrn3Q8BHH8 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC16.32■□□□□ 0.2
Clrn3Q8BHH8 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clrn3Q8BHH8 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC16.32■□□□□ 0.2
Clrn3Q8BHH8 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Clrn3Q8BHH8 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Clrn3Q8BHH8 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Clrn3Q8BHH8 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clrn3Q8BHH8 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clrn3Q8BHH8 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clrn3Q8BHH8 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Clrn3Q8BHH8 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Clrn3Q8BHH8 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC16.31■□□□□ 0.2
Clrn3Q8BHH8 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clrn3Q8BHH8 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC16.31■□□□□ 0.2
Clrn3Q8BHH8 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Clrn3Q8BHH8 Gm44878-201ENSMUST00000205812 1295 ntBASIC16.31■□□□□ 0.2
Clrn3Q8BHH8 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clrn3Q8BHH8 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Clrn3Q8BHH8 Dancr-204ENSMUST00000132389 2347 ntBASIC16.31■□□□□ 0.2
Clrn3Q8BHH8 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clrn3Q8BHH8 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clrn3Q8BHH8 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clrn3Q8BHH8 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clrn3Q8BHH8 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clrn3Q8BHH8 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clrn3Q8BHH8 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Clrn3Q8BHH8 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Clrn3Q8BHH8 Gm12669-201ENSMUST00000122162 1009 ntBASIC16.3■□□□□ 0.2
Clrn3Q8BHH8 Gm8969-201ENSMUST00000199694 526 ntBASIC16.3■□□□□ 0.2
Clrn3Q8BHH8 Gm29791-202ENSMUST00000207888 369 ntBASIC16.3■□□□□ 0.2
Clrn3Q8BHH8 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Clrn3Q8BHH8 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clrn3Q8BHH8 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clrn3Q8BHH8 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clrn3Q8BHH8 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Clrn3Q8BHH8 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clrn3Q8BHH8 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Clrn3Q8BHH8 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clrn3Q8BHH8 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Clrn3Q8BHH8 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clrn3Q8BHH8 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Clrn3Q8BHH8 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms