Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC17.17■□□□□ 0.34
Ubp1Q811S7 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ubp1Q811S7 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ubp1Q811S7 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ubp1Q811S7 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ubp1Q811S7 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ubp1Q811S7 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ubp1Q811S7 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ubp1Q811S7 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ubp1Q811S7 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ubp1Q811S7 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ubp1Q811S7 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ubp1Q811S7 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Ubp1Q811S7 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ubp1Q811S7 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.16■□□□□ 0.34
Ubp1Q811S7 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ubp1Q811S7 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Ubp1Q811S7 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Ubp1Q811S7 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ubp1Q811S7 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ubp1Q811S7 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ubp1Q811S7 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ubp1Q811S7 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Ubp1Q811S7 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ubp1Q811S7 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.15■□□□□ 0.34
Ubp1Q811S7 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.15■□□□□ 0.34
Ubp1Q811S7 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ubp1Q811S7 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.15■□□□□ 0.34
Ubp1Q811S7 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ubp1Q811S7 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ubp1Q811S7 Gm10517-202ENSMUST00000192970 758 ntBASIC17.15■□□□□ 0.34
Ubp1Q811S7 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ubp1Q811S7 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Ubp1Q811S7 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ubp1Q811S7 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
Ubp1Q811S7 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.15■□□□□ 0.34
Ubp1Q811S7 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ubp1Q811S7 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ubp1Q811S7 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ubp1Q811S7 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Ubp1Q811S7 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ubp1Q811S7 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ubp1Q811S7 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ubp1Q811S7 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.14■□□□□ 0.33
Ubp1Q811S7 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.14■□□□□ 0.33
Ubp1Q811S7 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ubp1Q811S7 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ubp1Q811S7 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.14■□□□□ 0.33
Ubp1Q811S7 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ubp1Q811S7 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ubp1Q811S7 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ubp1Q811S7 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ubp1Q811S7 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ubp1Q811S7 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ubp1Q811S7 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ubp1Q811S7 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ubp1Q811S7 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ubp1Q811S7 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ubp1Q811S7 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ubp1Q811S7 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.13■□□□□ 0.33
Ubp1Q811S7 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC17.13■□□□□ 0.33
Ubp1Q811S7 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ubp1Q811S7 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Ubp1Q811S7 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ubp1Q811S7 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ubp1Q811S7 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ubp1Q811S7 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ubp1Q811S7 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ubp1Q811S7 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ubp1Q811S7 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.12■□□□□ 0.33
Ubp1Q811S7 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ubp1Q811S7 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Ubp1Q811S7 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ubp1Q811S7 Gm715-201ENSMUST00000117865 831 ntBASIC17.12■□□□□ 0.33
Ubp1Q811S7 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ubp1Q811S7 AC175538.1-201ENSMUST00000225343 1269 ntBASIC17.12■□□□□ 0.33
Ubp1Q811S7 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ubp1Q811S7 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ubp1Q811S7 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ubp1Q811S7 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ubp1Q811S7 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ubp1Q811S7 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ubp1Q811S7 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ubp1Q811S7 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Ubp1Q811S7 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ubp1Q811S7 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ubp1Q811S7 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ubp1Q811S7 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ubp1Q811S7 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ubp1Q811S7 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ubp1Q811S7 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Ubp1Q811S7 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ubp1Q811S7 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ubp1Q811S7 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ubp1Q811S7 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Ubp1Q811S7 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.11■□□□□ 0.33
Ubp1Q811S7 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ubp1Q811S7 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ubp1Q811S7 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Ubp1Q811S7 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms