Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Trnp1Q80ZI1 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trnp1Q80ZI1 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trnp1Q80ZI1 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trnp1Q80ZI1 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trnp1Q80ZI1 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Trnp1Q80ZI1 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trnp1Q80ZI1 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC19.68■□□□□ 0.74
Trnp1Q80ZI1 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trnp1Q80ZI1 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trnp1Q80ZI1 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trnp1Q80ZI1 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Trnp1Q80ZI1 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trnp1Q80ZI1 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC19.67■□□□□ 0.74
Trnp1Q80ZI1 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trnp1Q80ZI1 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trnp1Q80ZI1 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Trnp1Q80ZI1 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trnp1Q80ZI1 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trnp1Q80ZI1 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trnp1Q80ZI1 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.66■□□□□ 0.74
Trnp1Q80ZI1 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trnp1Q80ZI1 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC19.66■□□□□ 0.74
Trnp1Q80ZI1 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trnp1Q80ZI1 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Trnp1Q80ZI1 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC19.66■□□□□ 0.74
Trnp1Q80ZI1 Gm18195-201ENSMUST00000207604 706 ntBASIC19.66■□□□□ 0.74
Trnp1Q80ZI1 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trnp1Q80ZI1 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
Trnp1Q80ZI1 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Trnp1Q80ZI1 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.66■□□□□ 0.74
Trnp1Q80ZI1 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trnp1Q80ZI1 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trnp1Q80ZI1 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trnp1Q80ZI1 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Trnp1Q80ZI1 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trnp1Q80ZI1 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC19.65■□□□□ 0.74
Trnp1Q80ZI1 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trnp1Q80ZI1 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trnp1Q80ZI1 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trnp1Q80ZI1 Gm11452-201ENSMUST00000122376 690 ntBASIC19.65■□□□□ 0.74
Trnp1Q80ZI1 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trnp1Q80ZI1 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Trnp1Q80ZI1 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Trnp1Q80ZI1 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC19.65■□□□□ 0.74
Trnp1Q80ZI1 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trnp1Q80ZI1 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trnp1Q80ZI1 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Trnp1Q80ZI1 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Trnp1Q80ZI1 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.64■□□□□ 0.74
Trnp1Q80ZI1 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Trnp1Q80ZI1 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trnp1Q80ZI1 Gm15372-201ENSMUST00000120729 834 ntBASIC19.64■□□□□ 0.73
Trnp1Q80ZI1 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Trnp1Q80ZI1 Gm10052-201ENSMUST00000168019 960 ntBASIC19.64■□□□□ 0.73
Trnp1Q80ZI1 Gm7729-201ENSMUST00000050143 801 ntBASIC19.64■□□□□ 0.73
Trnp1Q80ZI1 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trnp1Q80ZI1 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC19.64■□□□□ 0.73
Trnp1Q80ZI1 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trnp1Q80ZI1 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trnp1Q80ZI1 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trnp1Q80ZI1 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trnp1Q80ZI1 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trnp1Q80ZI1 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Trnp1Q80ZI1 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trnp1Q80ZI1 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trnp1Q80ZI1 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trnp1Q80ZI1 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC19.63■□□□□ 0.73
Trnp1Q80ZI1 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
Trnp1Q80ZI1 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Trnp1Q80ZI1 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC19.63■□□□□ 0.73
Trnp1Q80ZI1 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC19.63■□□□□ 0.73
Trnp1Q80ZI1 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Trnp1Q80ZI1 AC159301.1-201ENSMUST00000225130 1182 ntBASIC19.63■□□□□ 0.73
Trnp1Q80ZI1 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC19.63■□□□□ 0.73
Trnp1Q80ZI1 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trnp1Q80ZI1 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Trnp1Q80ZI1 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trnp1Q80ZI1 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Trnp1Q80ZI1 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Trnp1Q80ZI1 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trnp1Q80ZI1 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trnp1Q80ZI1 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Trnp1Q80ZI1 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trnp1Q80ZI1 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Trnp1Q80ZI1 Gm5712-201ENSMUST00000199748 1043 ntBASIC19.62■□□□□ 0.73
Trnp1Q80ZI1 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trnp1Q80ZI1 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Trnp1Q80ZI1 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trnp1Q80ZI1 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trnp1Q80ZI1 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Trnp1Q80ZI1 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trnp1Q80ZI1 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC19.62■□□□□ 0.73
Trnp1Q80ZI1 Gm37374-201ENSMUST00000194954 1829 ntBASIC19.62■□□□□ 0.73
Trnp1Q80ZI1 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trnp1Q80ZI1 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trnp1Q80ZI1 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Trnp1Q80ZI1 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trnp1Q80ZI1 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Trnp1Q80ZI1 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms