Protein–RNA interactions for Protein: Q80XJ2

Rnf168, E3 ubiquitin-protein ligase RNF168, mousemouse

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf168Q80XJ2 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf168Q80XJ2 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Rnf168Q80XJ2 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Rnf168Q80XJ2 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf168Q80XJ2 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf168Q80XJ2 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC18.56■□□□□ 0.56
Rnf168Q80XJ2 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Rnf168Q80XJ2 Gm38027-201ENSMUST00000192315 235 ntBASIC18.56■□□□□ 0.56
Rnf168Q80XJ2 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.56■□□□□ 0.56
Rnf168Q80XJ2 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf168Q80XJ2 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Rnf168Q80XJ2 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf168Q80XJ2 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.56■□□□□ 0.56
Rnf168Q80XJ2 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.56■□□□□ 0.56
Rnf168Q80XJ2 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf168Q80XJ2 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf168Q80XJ2 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf168Q80XJ2 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf168Q80XJ2 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf168Q80XJ2 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf168Q80XJ2 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf168Q80XJ2 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf168Q80XJ2 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf168Q80XJ2 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf168Q80XJ2 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf168Q80XJ2 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf168Q80XJ2 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf168Q80XJ2 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf168Q80XJ2 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf168Q80XJ2 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Rnf168Q80XJ2 Gm13401-201ENSMUST00000117074 291 ntBASIC18.55■□□□□ 0.56
Rnf168Q80XJ2 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC18.55■□□□□ 0.56
Rnf168Q80XJ2 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC18.55■□□□□ 0.56
Rnf168Q80XJ2 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC18.55■□□□□ 0.56
Rnf168Q80XJ2 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.55■□□□□ 0.56
Rnf168Q80XJ2 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf168Q80XJ2 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf168Q80XJ2 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf168Q80XJ2 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Rnf168Q80XJ2 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf168Q80XJ2 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf168Q80XJ2 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.54■□□□□ 0.56
Rnf168Q80XJ2 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf168Q80XJ2 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf168Q80XJ2 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf168Q80XJ2 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf168Q80XJ2 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf168Q80XJ2 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf168Q80XJ2 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.54■□□□□ 0.56
Rnf168Q80XJ2 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC18.54■□□□□ 0.56
Rnf168Q80XJ2 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC18.54■□□□□ 0.56
Rnf168Q80XJ2 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf168Q80XJ2 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf168Q80XJ2 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf168Q80XJ2 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Rnf168Q80XJ2 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Rnf168Q80XJ2 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf168Q80XJ2 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf168Q80XJ2 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf168Q80XJ2 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf168Q80XJ2 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf168Q80XJ2 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf168Q80XJ2 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf168Q80XJ2 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf168Q80XJ2 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf168Q80XJ2 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf168Q80XJ2 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf168Q80XJ2 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf168Q80XJ2 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf168Q80XJ2 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf168Q80XJ2 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf168Q80XJ2 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf168Q80XJ2 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf168Q80XJ2 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf168Q80XJ2 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Rnf168Q80XJ2 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC18.53■□□□□ 0.56
Rnf168Q80XJ2 Gm45058-201ENSMUST00000205810 766 ntBASIC18.53■□□□□ 0.56
Rnf168Q80XJ2 Gm4974-201ENSMUST00000209974 875 ntBASIC18.53■□□□□ 0.56
Rnf168Q80XJ2 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf168Q80XJ2 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.53■□□□□ 0.56
Rnf168Q80XJ2 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf168Q80XJ2 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf168Q80XJ2 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.53■□□□□ 0.56
Rnf168Q80XJ2 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf168Q80XJ2 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf168Q80XJ2 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf168Q80XJ2 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.53■□□□□ 0.56
Rnf168Q80XJ2 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf168Q80XJ2 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Rnf168Q80XJ2 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf168Q80XJ2 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf168Q80XJ2 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf168Q80XJ2 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf168Q80XJ2 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf168Q80XJ2 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf168Q80XJ2 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Rnf168Q80XJ2 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf168Q80XJ2 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rnf168Q80XJ2 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rnf168Q80XJ2 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms