Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Vrk1Q80X41 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vrk1Q80X41 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vrk1Q80X41 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vrk1Q80X41 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vrk1Q80X41 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Vrk1Q80X41 Gm13474-201ENSMUST00000122466 815 ntBASIC16.61■□□□□ 0.25
Vrk1Q80X41 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Vrk1Q80X41 Gm29791-202ENSMUST00000207888 369 ntBASIC16.61■□□□□ 0.25
Vrk1Q80X41 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vrk1Q80X41 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Vrk1Q80X41 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vrk1Q80X41 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vrk1Q80X41 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vrk1Q80X41 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Vrk1Q80X41 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC16.61■□□□□ 0.25
Vrk1Q80X41 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vrk1Q80X41 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Vrk1Q80X41 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vrk1Q80X41 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Vrk1Q80X41 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vrk1Q80X41 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vrk1Q80X41 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Vrk1Q80X41 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Vrk1Q80X41 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vrk1Q80X41 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vrk1Q80X41 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Vrk1Q80X41 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Vrk1Q80X41 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vrk1Q80X41 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC16.6■□□□□ 0.25
Vrk1Q80X41 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vrk1Q80X41 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vrk1Q80X41 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vrk1Q80X41 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Vrk1Q80X41 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vrk1Q80X41 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vrk1Q80X41 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Vrk1Q80X41 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC16.6■□□□□ 0.25
Vrk1Q80X41 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vrk1Q80X41 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vrk1Q80X41 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Vrk1Q80X41 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Vrk1Q80X41 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC16.59■□□□□ 0.25
Vrk1Q80X41 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vrk1Q80X41 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vrk1Q80X41 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Vrk1Q80X41 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vrk1Q80X41 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vrk1Q80X41 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Vrk1Q80X41 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Vrk1Q80X41 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vrk1Q80X41 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Vrk1Q80X41 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
Vrk1Q80X41 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Vrk1Q80X41 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vrk1Q80X41 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Vrk1Q80X41 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Vrk1Q80X41 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Vrk1Q80X41 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Vrk1Q80X41 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vrk1Q80X41 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Vrk1Q80X41 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Vrk1Q80X41 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Vrk1Q80X41 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Vrk1Q80X41 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Vrk1Q80X41 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Vrk1Q80X41 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Vrk1Q80X41 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Vrk1Q80X41 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.58■□□□□ 0.24
Vrk1Q80X41 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vrk1Q80X41 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vrk1Q80X41 Gm25016-201ENSMUST00000158399 131 ntBASIC16.58■□□□□ 0.24
Vrk1Q80X41 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vrk1Q80X41 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vrk1Q80X41 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Vrk1Q80X41 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Vrk1Q80X41 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vrk1Q80X41 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Vrk1Q80X41 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Vrk1Q80X41 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vrk1Q80X41 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Vrk1Q80X41 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vrk1Q80X41 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.57■□□□□ 0.24
Vrk1Q80X41 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vrk1Q80X41 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Vrk1Q80X41 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vrk1Q80X41 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.57■□□□□ 0.24
Vrk1Q80X41 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Vrk1Q80X41 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC16.57■□□□□ 0.24
Vrk1Q80X41 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vrk1Q80X41 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vrk1Q80X41 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vrk1Q80X41 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vrk1Q80X41 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vrk1Q80X41 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vrk1Q80X41 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vrk1Q80X41 Grk6-206ENSMUST00000224995 2971 ntBASIC16.57■□□□□ 0.24
Vrk1Q80X41 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC16.57■□□□□ 0.24
Vrk1Q80X41 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vrk1Q80X41 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms