Protein–RNA interactions for Protein: Q6TDU8

Casc1, Protein CASC1, mousemouse

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc1Q6TDU8 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Casc1Q6TDU8 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Casc1Q6TDU8 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Casc1Q6TDU8 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
Casc1Q6TDU8 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Casc1Q6TDU8 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Casc1Q6TDU8 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Casc1Q6TDU8 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Casc1Q6TDU8 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Casc1Q6TDU8 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Casc1Q6TDU8 Gm2399-201ENSMUST00000104944 225 ntBASIC20.81■□□□□ 0.92
Casc1Q6TDU8 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC20.81■□□□□ 0.92
Casc1Q6TDU8 Trmt13-210ENSMUST00000198454 880 ntBASIC20.81■□□□□ 0.92
Casc1Q6TDU8 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC20.81■□□□□ 0.92
Casc1Q6TDU8 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Casc1Q6TDU8 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Casc1Q6TDU8 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC20.81■□□□□ 0.92
Casc1Q6TDU8 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Casc1Q6TDU8 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
Casc1Q6TDU8 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Casc1Q6TDU8 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Casc1Q6TDU8 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC20.8■□□□□ 0.92
Casc1Q6TDU8 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Casc1Q6TDU8 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Casc1Q6TDU8 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Casc1Q6TDU8 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Casc1Q6TDU8 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Casc1Q6TDU8 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Casc1Q6TDU8 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Casc1Q6TDU8 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Casc1Q6TDU8 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Casc1Q6TDU8 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Casc1Q6TDU8 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Casc1Q6TDU8 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Casc1Q6TDU8 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Casc1Q6TDU8 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC20.79■□□□□ 0.92
Casc1Q6TDU8 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC20.79■□□□□ 0.92
Casc1Q6TDU8 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Casc1Q6TDU8 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Casc1Q6TDU8 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Casc1Q6TDU8 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Casc1Q6TDU8 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Casc1Q6TDU8 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
Casc1Q6TDU8 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Casc1Q6TDU8 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Casc1Q6TDU8 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Casc1Q6TDU8 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Casc1Q6TDU8 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Casc1Q6TDU8 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Casc1Q6TDU8 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Casc1Q6TDU8 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC20.78■□□□□ 0.92
Casc1Q6TDU8 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Casc1Q6TDU8 Gm44878-201ENSMUST00000205812 1295 ntBASIC20.78■□□□□ 0.92
Casc1Q6TDU8 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Casc1Q6TDU8 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Casc1Q6TDU8 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Casc1Q6TDU8 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Casc1Q6TDU8 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Casc1Q6TDU8 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC20.78■□□□□ 0.92
Casc1Q6TDU8 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Casc1Q6TDU8 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
Casc1Q6TDU8 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Casc1Q6TDU8 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Casc1Q6TDU8 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Casc1Q6TDU8 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Casc1Q6TDU8 Tgds-204ENSMUST00000228543 1594 ntBASIC20.77■□□□□ 0.92
Casc1Q6TDU8 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Casc1Q6TDU8 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Casc1Q6TDU8 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Casc1Q6TDU8 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Casc1Q6TDU8 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Casc1Q6TDU8 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
Casc1Q6TDU8 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC20.77■□□□□ 0.91
Casc1Q6TDU8 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Casc1Q6TDU8 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Casc1Q6TDU8 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Casc1Q6TDU8 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Casc1Q6TDU8 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Casc1Q6TDU8 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC20.76■□□□□ 0.91
Casc1Q6TDU8 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC20.76■□□□□ 0.91
Casc1Q6TDU8 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC20.76■□□□□ 0.91
Casc1Q6TDU8 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Casc1Q6TDU8 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Casc1Q6TDU8 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Casc1Q6TDU8 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Casc1Q6TDU8 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Casc1Q6TDU8 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Casc1Q6TDU8 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC20.76■□□□□ 0.91
Casc1Q6TDU8 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Casc1Q6TDU8 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Casc1Q6TDU8 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Casc1Q6TDU8 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Casc1Q6TDU8 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Casc1Q6TDU8 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Casc1Q6TDU8 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Casc1Q6TDU8 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Casc1Q6TDU8 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Casc1Q6TDU8 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Casc1Q6TDU8 Gm15847-201ENSMUST00000121417 1065 ntBASIC20.75■□□□□ 0.91
Casc1Q6TDU8 Wnt10b-205ENSMUST00000226846 1204 ntBASIC20.75■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms