Protein–RNA interactions for Protein: Q6S5L9

Shc4, SHC-transforming protein 4, mousemouse

Predictions only

Length 626 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shc4Q6S5L9 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shc4Q6S5L9 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shc4Q6S5L9 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shc4Q6S5L9 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Shc4Q6S5L9 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shc4Q6S5L9 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shc4Q6S5L9 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shc4Q6S5L9 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shc4Q6S5L9 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
Shc4Q6S5L9 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shc4Q6S5L9 Gm3375-201ENSMUST00000203929 796 ntBASIC16.31■□□□□ 0.2
Shc4Q6S5L9 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC16.31■□□□□ 0.2
Shc4Q6S5L9 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shc4Q6S5L9 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shc4Q6S5L9 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shc4Q6S5L9 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shc4Q6S5L9 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shc4Q6S5L9 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Shc4Q6S5L9 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Shc4Q6S5L9 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC16.3■□□□□ 0.2
Shc4Q6S5L9 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Shc4Q6S5L9 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Shc4Q6S5L9 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Shc4Q6S5L9 AC108858.1-201ENSMUST00000228461 1498 ntBASIC16.3■□□□□ 0.2
Shc4Q6S5L9 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC16.3■□□□□ 0.2
Shc4Q6S5L9 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Shc4Q6S5L9 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Shc4Q6S5L9 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Shc4Q6S5L9 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Shc4Q6S5L9 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC16.3■□□□□ 0.2
Shc4Q6S5L9 Gm10231-201ENSMUST00000181584 441 ntBASIC16.3■□□□□ 0.2
Shc4Q6S5L9 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Shc4Q6S5L9 Gm10175-202ENSMUST00000208752 441 ntBASIC16.3■□□□□ 0.2
Shc4Q6S5L9 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Shc4Q6S5L9 Gm45141-201ENSMUST00000206502 1888 ntBASIC16.3■□□□□ 0.2
Shc4Q6S5L9 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Shc4Q6S5L9 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Shc4Q6S5L9 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Shc4Q6S5L9 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Shc4Q6S5L9 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
Shc4Q6S5L9 Gm8668-201ENSMUST00000120559 1447 ntBASIC16.29■□□□□ 0.2
Shc4Q6S5L9 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Shc4Q6S5L9 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Shc4Q6S5L9 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Shc4Q6S5L9 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Shc4Q6S5L9 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC16.29■□□□□ 0.2
Shc4Q6S5L9 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Shc4Q6S5L9 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Shc4Q6S5L9 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Shc4Q6S5L9 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Shc4Q6S5L9 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Shc4Q6S5L9 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Shc4Q6S5L9 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.29■□□□□ 0.2
Shc4Q6S5L9 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shc4Q6S5L9 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Shc4Q6S5L9 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shc4Q6S5L9 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.28■□□□□ 0.2
Shc4Q6S5L9 Gm11539-201ENSMUST00000119837 557 ntBASIC16.28■□□□□ 0.2
Shc4Q6S5L9 Gm13436-201ENSMUST00000120418 567 ntBASIC16.28■□□□□ 0.2
Shc4Q6S5L9 Gm13559-201ENSMUST00000120476 863 ntBASIC16.28■□□□□ 0.2
Shc4Q6S5L9 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC16.28■□□□□ 0.2
Shc4Q6S5L9 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shc4Q6S5L9 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shc4Q6S5L9 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shc4Q6S5L9 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shc4Q6S5L9 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.28■□□□□ 0.2
Shc4Q6S5L9 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Shc4Q6S5L9 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Shc4Q6S5L9 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Shc4Q6S5L9 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Shc4Q6S5L9 Gm10517-202ENSMUST00000192970 758 ntBASIC16.27■□□□□ 0.2
Shc4Q6S5L9 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC16.27■□□□□ 0.2
Shc4Q6S5L9 AC130671.1-201ENSMUST00000227384 1237 ntBASIC16.27■□□□□ 0.2
Shc4Q6S5L9 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Shc4Q6S5L9 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Shc4Q6S5L9 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Shc4Q6S5L9 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Shc4Q6S5L9 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Shc4Q6S5L9 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Shc4Q6S5L9 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Shc4Q6S5L9 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC16.27■□□□□ 0.19
Shc4Q6S5L9 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Shc4Q6S5L9 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Shc4Q6S5L9 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Shc4Q6S5L9 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Shc4Q6S5L9 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Shc4Q6S5L9 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Shc4Q6S5L9 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Shc4Q6S5L9 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Shc4Q6S5L9 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Shc4Q6S5L9 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Shc4Q6S5L9 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Shc4Q6S5L9 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC16.26■□□□□ 0.19
Shc4Q6S5L9 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Shc4Q6S5L9 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Shc4Q6S5L9 Gm9694-201ENSMUST00000193347 1189 ntBASIC16.26■□□□□ 0.19
Shc4Q6S5L9 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC16.26■□□□□ 0.19
Shc4Q6S5L9 AC159205.6-201ENSMUST00000224935 887 ntBASIC16.26■□□□□ 0.19
Shc4Q6S5L9 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Shc4Q6S5L9 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms